Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03120 ATGGCCGCCGCTGGATCCCTTCCTTCCTCCTTCACATCTCGCCTCCAGAACGACAACAAAACACGAATCGAAACCAGAACGCATGAAGGAAAGACAAACGGAAACGCAGGAAAGGAAAGAAGAATCGGTGACAGAGGGAGCGGTTCGAGGAGTCGTTCACGAGATTCAATTTTGGGTTTTTGTGGTTGTGGAATTCGGTCGTTGGGGTATTCGACGGAATCTGAAGCTGATTTTGTTGCTGCTAATGATGGAAATGAGTGTTATGGGAGTATCATTGTGGAGAATTTGAATAGGGTTTGTGCGGAAGAGGAGAAGAGATGGGTGGAGAAATGGGAGGACATGACTGTTGAGATATTGATTATATTATTATTTGTTATTACTGCAACTCTGTTAAATTTTATAAGGATGTTTCTCAAAGCACATGATGAGAATATCAAACAAGCAGAATTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGAAAGCTAAGAAGGAGGCTGAAATGGAAAAGGGTAAAAGCAGTGGTTTGACAAGGAAGAGTAAAAAAGATAAAGAAGAAGAAAGCTGA 576 0.4167 MAAAGSLPSSFTSRLQNDNKTRIETRTHEGKTNGNAGKERRIGDRGSGSRSRSRDSILGFCGCGIRSLGYSTESEADFVAANDGNECYGSIIVENLNRVCAEEEKRWVEKWEDMTVEILIILLFVITATLLNFIRMFLKAHDENIKQAELEKKKAEKEAEMEKKAKKEAEMEKGKSSGLTRKSKKDKEEES 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03120 191 Coils Coil 138 172 - -
Vifa2g03120 191 SUPERFAMILY Formin homology 2 domain (FH2 domain) 126 166 - -
Vifa2g03120 191 MobiDBLite consensus disorder prediction 19 51 - -
Vifa2g03120 191 MobiDBLite consensus disorder prediction 1 54 - -
Vifa2g03120 191 MobiDBLite consensus disorder prediction 151 191 - -
Vifa2g03120 191 MobiDBLite consensus disorder prediction 1 18 - -
Vifa2g03120 191 Gene3D Formin, FH2 domain 93 191 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03120 Vifa-Chr2 896328160 896329275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03120 126 186 FH2 protein (formin) Gene Family AT5G07740 60.656 1.92e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03120 K00555 - gmx:100788340 80.8777