Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03113 ATGGCGCTAGCAGCACTCCCTCTATTGTCTAATCGTCCATGCCATTGCTCTTCTTCTTTAATAGCCTTTCTTCCTTCACATTCCCGTCAACCCTCAACCTTTTTCCCTCATCTTCAAACTCAACCCTTCCTCTCCCCACTCACCAAATCACAACCACCAAACAGCAGCTCTTTCCTTTTCCAATTTCGTCCCTCCATCCACTGCCGCTGCACTTCCCACAAGTCCAATGTCGACTTTCAATTCGTGTCACTCGTCTCTTTGTTTCAAGAAATCGGTATCAGCTTTGAGGAAACCGAATCGCTCTTGAGCAACGCTTCCGAACTTAGCTCGATACAACTAGATTCATTGCATGGTCGCATTCTTCTTCTACAGTCTCTCGGGTTAGATCGTGTGTCCATCAATCAGTTAGTTACAAAGCAATTAAATGTGCTAACTTCTAATGAAATTGACCCTTTGTTAAGCTTTTTGAAAAATGAATTGCATGGACAGCTTAAGCAAGCTAAGGTGAAACTTGTTTTATCAAAAAAGTTATCCGATTTTCCTCACAAGGTTCAATTGCTTCTTGACCGTGGAATTGCGGGTGACAAGATTGTACATGTGCTTAACAAAGTGGATTTGTCAAAGGCAATTTGTCATAGGTCGATGGAAGAACTTGAAAGACTCAAACCGAGAATCAGGGTTCTTACTGAGTTAAGTGGCGGGGCGGAACATATTGAGGAACATATAGAGTTTCTTAGGTCTTTTGTAGAACTTGATGATCAACAAATATTTAAGATAGTGTTGGTGTTTCCAGCAATCTTCACTAGTAGTAGAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCAAGGATTGTGGGTTAGATTCTTGCGAAATCTTTATGTTCTTGATCAATGCACCAGTGTTTTTGGCCATTTCGTTCCGAGAGAACCTTGCGTATAGGCTTGTGTTTTTGGTCAAGCTTGGGTATGAATATAGGACAAAAGAGTTGCCAGTGGCGATGGGGATTAGTTCTAGAGTGGCCTGTGAGAATATGCAGAAGACGTATAATCACGCCGCTCTAGAGAAGAAGATGAAGTATTTGACGGAGGAGATGGATCATGACATTAAGAAGTTGCTTTCCTTTTCCCTGCATTTCTTTGATACAATTTAG 1152 0.4158 MALAALPLLSNRPCHCSSSLIAFLPSHSRQPSTFFPHLQTQPFLSPLTKSQPPNSSSFLFQFRPSIHCRCTSHKSNVDFQFVSLVSLFQEIGISFEETESLLSNASELSSIQLDSLHGRILLLQSLGLDRVSINQLVTKQLNVLTSNEIDPLLSFLKNELHGQLKQAKVKLVLSKKLSDFPHKVQLLLDRGIAGDKIVHVLNKVDLSKAICHRSMEELERLKPRIRVLTELSGGAEHIEEHIEFLRSFVELDDQQIFKIVLVFPAIFTSSRERKLRPRIQFLKDCGLDSCEIFMFLINAPVFLAISFRENLAYRLVFLVKLGYEYRTKELPVAMGISSRVACENMQKTYNHAALEKKMKYLTEEMDHDIKKLLSFSLHFFDTI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03113 383 Gene3D Transcription termination factor 3, mitochondrial 235 380 IPR038538 -
Vifa2g03113 383 Gene3D Transcription termination factor 3, mitochondrial 65 234 IPR038538 -
Vifa2g03113 383 Pfam mTERF 86 375 IPR003690 GO:0003690|GO:0006355
Vifa2g03113 383 PANTHER CGI-12 PROTEIN-RELATED 236 363 IPR003690 GO:0003690|GO:0006355
Vifa2g03113 383 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Vifa2g03113 383 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03113 Vifa-Chr2 893127399 893128848 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa2g03113 mTERF 2.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03113 - - gmx:100799904 325.094