Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03082 ATGACTTCTTTAAATTTTTCTAGATTAACCATGATCATGACTATGTCTCTCTTTGTCCTCATCATAGTAGGGAGTGCCAATGCTCAACTTTCTACAAGCTTTTACTCAAGTTCTTGTCCCAAACTCTCTTCCACAGTGCAATCCACCATGCAATCAGCCATATCAAAAGAGGCTCGAATCGGTGCTTCTATTCTTCGGTTGTTCTTCCACGATTGCTTTGTCAACGGATGCGATGGGTCAATTCTACTCGATGACACGTCAAACTTTACCGGGGAGAAAAATGCATTTCCAAACAGAAACTCTGCTCGCGGATTTGAAGTCATTGATAATATAAAGACAGCGGTAGAGAACATATGTCCCGGAGTTGTATCTTGTGCTGATATTCTTGCCATTGCTGCCGCAGACTCTGTTGCAATTCTTGGAGGACCATCCTGGAATGTAAAACTCGGAAGAAGAGACGCTAAGACGGCTAGTCAGTCAGCTGCTAATACAGCCATCCCAGCACCAACATCCAACCTCAGTACACTTACCTCAATGTTTAGTGCAGTTGGTCTTTCTTCCAAGGACTTAGTCACATTGTCAGGTGCTCATACAATTGGACAAGCAAGGTGCACAAACTTTAGGGCACGGATCTACAACGAAACCAACATAGATGCTTCATTTGCTAGCACAAGACAATCAAATTGTCCAAGTACATCAGGCTCAGGTGATAACAATTTGGCTCCTCTTGATCTTCAGACCCCCACTTCTTTTGACAACAACTACTTCAAGAATCTTGTTCAAAACAAAGGTCTTCTCCATTCAGACCAACAACTTTTCAACGGTGGCTCCACCAACTCAATAGTGAGTGGCTATAGTACTAATCCAACCTCTTTTTCATCTGATTTTGCTGCTGCTATGATCAAGATGGGAGATATTACTCCTCTTACGGGTTCAAATGGAGAGATTAGGAAGAATTGTAGAAAAACCAACTAA 975 0.4226 MTSLNFSRLTMIMTMSLFVLIIVGSANAQLSTSFYSSSCPKLSSTVQSTMQSAISKEARIGASILRLFFHDCFVNGCDGSILLDDTSNFTGEKNAFPNRNSARGFEVIDNIKTAVENICPGVVSCADILAIAAADSVAILGGPSWNVKLGRRDAKTASQSAANTAIPAPTSNLSTLTSMFSAVGLSSKDLVTLSGAHTIGQARCTNFRARIYNETNIDASFASTRQSNCPSTSGSGDNNLAPLDLQTPTSFDNNYFKNLVQNKGLLHSDQQLFNGGSTNSIVSGYSTNPTSFSSDFAAAMIKMGDITPLTGSNGEIRKNCRKTN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03082 324 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 ProSiteProfiles Plant heme peroxidase family profile. 29 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 FunFam Peroxidase 33 179 - -
Vifa2g03082 324 Gene3D - 34 321 - -
Vifa2g03082 324 SUPERFAMILY Heme-dependent peroxidases 29 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 Gene3D Peroxidase, domain 2 167 303 - -
Vifa2g03082 324 FunFam Peroxidase 167 303 - -
Vifa2g03082 324 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vifa2g03082 324 PANTHER PEROXIDASE 72-RELATED 27 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa2g03082 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Vifa2g03082 324 CDD secretory_peroxidase 29 323 IPR033905 GO:0004601|GO:0042744
Vifa2g03082 324 Pfam Peroxidase 46 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03082 Vifa-Chr2 880699596 880700888 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03082 28 324 Peroxidase AT5G05340 77.778 6.84e-175 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03082 K00430 - gmx:100803637 521.931