Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03072 ATGGGAACTGTTAGTAACATTGGTTTCTCTTCATTATTCAGAATTTCTTTGAACACAGACCTACTTTCAAAACAAAGAAAATACAAATCGCCATGCAGTTTTATAGTTCCTCTGAACTACTCTCTTAAGGTGAACAAAATCTGTTCTAAACTATCAGAAAGTGGGATTGAAGTATCTAAATCTAAGGATATGATGGAAGAATACAATATAGCTATGAAGAGCATGATGAGGAATCCTTATGAGTATCATCATGATCTAGGTATGAATTATACAGTTATAACTGACAATTTGATTGTGGGGTCCCAACCACAGAAACCGGAAGATGTAGATCATCTTAAGAATGAAGAAGGTGTGGCATACATTCTAAACTTGCAACAGGATAAAGATGCTGAGTTTTGGGGAATAGACTTGCAGTCAATTATAAAAAGGTGTCGCGAAATTGAAATTCGGCACATGAGGAGACCGGCAGTAGACTTTGATCCAAACTCTTTGCGAAGTGCACTACCGAAAGCAGTTTCATCTTTGGAATGGGCGATTTCTGAGGGAAAAGGAAAAGTTTATGTGCATTGTACTGCAGGACTTGGAAGAGCTCCAGCAGTAGCAATATCTTATTTGTTTTGGTTTTGTGACATGAATCTAAATGAAGCATATGATATGCTAACTTCAAAGAGACCTTGCGGACCGAATAAAAAAGCGATACGTGGAGCTACTTATGATCTGGCTAAGAATGATCCGTGGAAGGAGCCATTTGAGAGTCTTTCAGACCATGCTTTTGGGGATATAGCAGACTGGGAGAGGAACCTGATTCAAAATGGTGTCCGTGCTCTTCGTGGAACTTGA 840 0.3893 MGTVSNIGFSSLFRISLNTDLLSKQRKYKSPCSFIVPLNYSLKVNKICSKLSESGIEVSKSKDMMEEYNIAMKSMMRNPYEYHHDLGMNYTVITDNLIVGSQPQKPEDVDHLKNEEGVAYILNLQQDKDAEFWGIDLQSIIKRCREIEIRHMRRPAVDFDPNSLRSALPKAVSSLEWAISEGKGKVYVHCTAGLGRAPAVAISYLFWFCDMNLNEAYDMLTSKRPCGPNKKAIRGATYDLAKNDPWKEPFESLSDHAFGDIADWERNLIQNGVRALRGT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03072 279 ProSiteProfiles Dual specificity protein phosphatase domain profile. 89 246 IPR020422 GO:0006470|GO:0008138
Vifa2g03072 279 Gene3D Protein tyrosine phosphatase superfamily 72 279 IPR029021 -
Vifa2g03072 279 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 72 279 - -
Vifa2g03072 279 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 166 225 IPR000387 GO:0016311|GO:0016791
Vifa2g03072 279 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 51 250 - -
Vifa2g03072 279 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 86 231 IPR029021 -
Vifa2g03072 279 SMART dsp_5 89 231 IPR020422 GO:0006470|GO:0008138
Vifa2g03072 279 CDD DSP_laforin-like 88 235 IPR045204 GO:0019203
Vifa2g03072 279 Pfam Dual specificity phosphatase, catalytic domain 110 229 IPR000340 GO:0008138|GO:0016311
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03072 54 279 Protein tyrosine phosphatase (PTP) family AT3G10940 78.319 9.96e-138 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03072 - - gmx:100805592 462.996