Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g03019 | ATGAGTGATGTTGTTGTTTCTTCCAAGAAGAAGTTGCTCATTAAGGAGCTTCTTCAGGGTCAAGAGTATGCTACTCAGCTGAAGTTTCTGCTTAAGAATCATGTTGGTTTTGGTTCTGATGGGTCTGCTTCGGTTAAGGAATTGGCAGCTAATGTGCTGAGATCTTTCTCTCAGACTATTTCTGTGATGACTTCTGACGGTTGTAATTTTGATGAGGTAGAAGAAACCGGTTCTTTGGTGTTTGCTTTATGTAATGATGATGTGAAATCTGAAGATTCAAGTGAGAGTAAGAAGAGATTGTTGTCTAACACAAAAGATAGAAGAGGTTCCTACAAAAGAAGCAGGAAGACTGATGAGACAAGAACTATTGTTTCTAAAACAACTGGTGACATTCATTCCTGGAGAAAGTACGGACAGAAGGAAATCCTCAATTCTCAATTTCCTAGGAGCTACTTTAGATGTACCCGGAAGCATGATCAAGGTTGCAGAGCAACCAAACAGGGTTCCCCTATTGTTAGCTCAGAAAGACCAATTGTGAAACAAGAGTATCCGATCAATGACGACATTACTACTACTCCGAGGAGTGTTCTTGCGGACGATTTATTCGATGCTAACTTGTGGTCTGATTTTAAGGATTTTGAACTATCCAAGCCAGATACTAGTGTGTATTCATGTAGTGAATCTCAAAACCTTGAAATTGGTTTTGGGGTGTTTTCTGATTTCAGCAATGATTTAGTGTATTTTGATGAAAGGCATTTGCTATAA | 765 | 0.3895 | MSDVVVSSKKKLLIKELLQGQEYATQLKFLLKNHVGFGSDGSASVKELAANVLRSFSQTISVMTSDGCNFDEVEETGSLVFALCNDDVKSEDSSESKKRLLSNTKDRRGSYKRSRKTDETRTIVSKTTGDIHSWRKYGQKEILNSQFPRSYFRCTRKHDQGCRATKQGSPIVSSERPIVKQEYPINDDITTTPRSVLADDLFDANLWSDFKDFELSKPDTSVYSCSESQNLEIGFGVFSDFSNDLVYFDERHLL | 254 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g03019 | 254 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 16 | 167 | IPR044810 | GO:0003700 | |
Vifa2g03019 | 254 | Pfam | WRKY DNA -binding domain | 130 | 167 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa2g03019 | 254 | SMART | WRKY_cls | 128 | 185 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa2g03019 | 254 | Gene3D | WRKY domain | 112 | 183 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa2g03019 | 254 | ProSiteProfiles | WRKY domain profile. | 130 | 179 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa2g03019 | 254 | MobiDBLite | consensus disorder prediction | 94 | 121 | - | - | |
Vifa2g03019 | 254 | SUPERFAMILY | WRKY DNA-binding domain | 126 | 169 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g03019 | Vifa-Chr2 | 859837126 | 859838576 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g03019 | 8 | 167 | WRKY Transcription Factor Family | AT3G56400 | 44.578 | 1.99e-34 | 124 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vifa2g03019 | WRKY | 1.9e-15 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g03019 | - | - | tpra:123913408 | 239.58 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g01059 | 1 | 174357944 | 174377687 | Vifa2g03019 | 2 | 859837126 | 859838576 | PCT |