Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02995 ATGGAGGAAGTGTTTTCTTTTTGTATGAAACTAGCTTCTTCACTTGCTGTTGTGGCTATTTTCAGCTGGATACTTTATGTTTATGGAAATTTGTGGTATAACTCTCAAAGGGTTAGAAGGAAGCTACAAATGCAAGGTGTTAAAGGGCCTCCACCTTCTTCTTTTCTACATGGGAATCTACCTGATATGCAGAGAATCAAATCACAAGCTACCTTATTATCCAAACCAAGTTATGATCAGTTTCTAGCTCATGATTATTCTGCAGCACTCTTCCCATTTTTTCAGCAGTGGAGGAAGCAATACGGTTTAGTGTACACTTACTCGATAGGGATGAAGCAACATCTATATATAAACGAACCGGATCTTGTTAAAGAAATGAACCAATGTATCACTTTGAGTTTGGGTAAGCCTTCTTATATTACTAACAAACTTTCACCAATGCTTGGTAATGGCATTTTGAGAGCCAATGGTCAGAGTTGGGCACAGCAGAGAAAACTTGTTGCAGCTGAGTTTTTCATGGACAAAGTTAAGGATATGGTGGGGCTTATGATAGAGTCGGCACAGCCATTACTTCTAAAATGGGAACAATTTTTTGAGGAGCAAGGTGGTGCCACTGCTGAAGTTAAAGTTGATGCTGATTTGAGAAGCTTTTCAGCTGATGTTATTTCAAGAGTTTGTTTTGGACATTCTTATTCTAAGGGAAAAGAAGTTTTCTTAAAGCTTAGAAGCATCCAAAAGATCATGTCAAACCATGGCTTCCTTTTTGGACAGAGCGGTTTCTTGGAGAAACTGAAATTTCGGACAAAGAAGGAAGATGAGATACACAGTTTGGAGAAAGAGATAGAATCATTGATATGGGAGTTGGTGGAGGAACGGAAGCGAGAATCCTCGTCAGAAAAGGATTTGATGCAGTTACTTCTGGAAGCAGCGATGAGTGATGAAAGTTTGGGGGAGGATTTCTCAAAGCAGTTCATTGTGGATAACTGCAAAAACATATACTTTGCTGGTCATGAAACTACTGCTGTTGCAGCTTCTTGGTGCTTGATGCTTCTTGCTTTATACCCCGAATGGCAAACTCGTATTAGGACTGAGGTTGCTCAACATTGCCCCAATGGCATACCTGATGCAGATTCTCTCCCTCTTTTGAAAACGGTGACTATGGTGATTCAAGAAGTGCTAAGATTATATCCACCAGCAGCCTTTGTATCAAGAGAAGCATATGAAGATATCCAAATTGGAAACCTAAATGTTCCAAAAGGTGTTTGTTTATGGACACTGATACCAACTTTGCACAGAGATCCTGAAATTTGGGGACCAGATTCAAATGAGTTTAAACCAGAAAGGTTCAGTGAGGGTGTTTCCAAGGCTATCAAGTTTCCACAAGCTTATGTGCCATTTGGAATAGGCACTAGATTGTGTGTGGGGAAGAACTTTGCAATGGTTGAACTAAAGGTTGTGCTAGCTCTTATTGTCGCAAAGTTCAGCTTCTCTTTGTCTCCTAGTTATAAGCATTCTCCTGCATACAACATGATTGTTGAGCCAGGATATGGTGTGTATATTCTCATTCAGAAGAACAAGAACTGA 1584 0.399 MEEVFSFCMKLASSLAVVAIFSWILYVYGNLWYNSQRVRRKLQMQGVKGPPPSSFLHGNLPDMQRIKSQATLLSKPSYDQFLAHDYSAALFPFFQQWRKQYGLVYTYSIGMKQHLYINEPDLVKEMNQCITLSLGKPSYITNKLSPMLGNGILRANGQSWAQQRKLVAAEFFMDKVKDMVGLMIESAQPLLLKWEQFFEEQGGATAEVKVDADLRSFSADVISRVCFGHSYSKGKEVFLKLRSIQKIMSNHGFLFGQSGFLEKLKFRTKKEDEIHSLEKEIESLIWELVEERKRESSSEKDLMQLLLEAAMSDESLGEDFSKQFIVDNCKNIYFAGHETTAVAASWCLMLLALYPEWQTRIRTEVAQHCPNGIPDADSLPLLKTVTMVIQEVLRLYPPAAFVSREAYEDIQIGNLNVPKGVCLWTLIPTLHRDPEIWGPDSNEFKPERFSEGVSKAIKFPQAYVPFGIGTRLCVGKNFAMVELKVVLALIVAKFSFSLSPSYKHSPAYNMIVEPGYGVYILIQKNKN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02995 527 Gene3D Cytochrome P450 31 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Vifa2g02995 527 Pfam Cytochrome P450 88 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 SUPERFAMILY Cytochrome P450 87 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 Coils Coil 267 294 - -
Vifa2g02995 527 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa2g02995 527 PANTHER CYTOCHROME P450 FAMILY MEMBER 29 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02995 Vifa-Chr2 854887757 854890816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02995 122 522 Cytochrome P450 AT5G24900 56.618 5.78e-174 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02995 K20661 - gmx:100815776 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02995 2 854887757 854890816 Vifa2g02995 2 854887757 854890816 ECH