Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02927 ATGAGTAGAATATCCATGTTACTGTGCTACATTACATTCCTTCATCTCATCTTGACTAGTTTTGCTTTTGCTCACTCCCATAACTATATCATCCACATGAACATATCAGCCATGCCCAAAGTATTCACAACCCAACACACATGGTACCAATCAATTGTTTCCACTAAGTTAATTTACTCCTACACACATGTCATTAACGGTTTCAGTGCTAATTTTTCACCAAAAGAGCTTCAATCCCTCAAAACTTCCCCAGGCTACATTTCATCCGTAAAAGATTTCAGCATGAAACTTTACACAACACATTCGCCTCACTTCCTTGGCCTCACTCCCAACATAGGCGCTTGGCATGATTCAGAGTTTGGCAGAGATGTAATTGTTGGTTTAGTTGACACTGGTATTTGGCCAGAAAGCAAAAGCTTCAATGATTATGGTATCACTAAAATTCCTTCAAAGTGGAAAGGCCATTGTGATTTCAATTCATCAGTTTGCAACAAAAAACTCATTGGAGCTAAGTTCTTCAACAAAGGACTATTAGCAATGTATCCAAACAGAATCGCAACTCTCCACTCTACACGTGACACTGATGGTCATGGTACACACGTTTCATCAATCGCAGCTGGAAGCAGAGTTGATTCTGTTTCATTCTATGGTTATGCACCTGGAACAGCTTCAGGAATAGCTCCAAATGCACGTGTAGCAATGTACAGAGTTGCTTATGAACAAGATTTGCTATCTTCTGATGTAATAGCTGCAATTGACGGCGCAATATCCGACGGCGTTGATGTTCTTTCCTTATCATTAGGAACTGATGAAGGGCGTTTGCCTCTGTATGAAGATCCTTTAGCTGTAGCAACTTTTGCAGCTATTGAAAAAGGTGTTTTTGTTTCAGCTGCAGCTGGAAATCGCGGACCCGGGCTTAACACTCTTCACAACGGAATACCATGGGTTATAACCGTGGCTGCTGGAGTTATGGATAGAGATTTTCAAGGGACTCTTACACTTGGAGATGGTACCAAAATCACAGGCTTGTCTCTTTATAAAGGTACCTTTCCTATCCACAATGTTCCAATTGTTTTCATGGGTTTATGTGAAAATGTTGAAGAATTGAAAAAAGTGAAGAGTAAGATTGTGGTCTGTGAAGGAAAAAATGGAACTAGGTTTTATCAACTAGTCTATTATTTGGATGAAGCAAAAGTGTTAGGAGCTGTTTTTATTTCAAATGACTCACATATAGAAGATACAGAAAATAGGTTCGCATCCCTCATTATTGATCCAAAAAATGGACAAGTTGTCAAAACTTACATCAACAGCAGTAGTAATTCTTCAATTGCAAGCTTGTCTTTCAAGAAAACGGTTTTTGGAACTAAACCAGCACCTACTGTTGATTCGTATAGCTCAAGAGGGCCATCATATAATTGTCCGTTTGTATTGAAACCCGACATTACTGCACCCGGTACTTCCATCTTAGCCGCATGGCCTGCAAATGTTCCCGTGAAAACAATACTGCCCTACAAATATTTCAGCGAATTCAATTTGTTAAGTGGAACTTCTATGGCATGTCCCCATGTTGCAGGCGTAGCGGCTCTTTTAAAAGGAGCACACCATGATTGGACTCCGGCAGCTATTAGGTCCGCAATTATGACAACATCAGACATATTTGATAATATTAAGGAACCTATCAAAATCATTGGAGAAGATAACAAAGTAGGAAACATTGCAAACCCTTTTGCATTGGGTGCTGGTCATGTCAATCCTAATAGAGCAATGGACCCCGGTCTTGTTTATGATGTTGGCGTGCAAGATTATGTTAATCTTCTCTGTGCACTTAACTACTCACAAAAAAACATCAGTGTTATTACAAGGTCCTCTTCCAATGATTGTTCTAAACCTTCATTGGATCTCAACTATCCTTCTGTTATTGCTTTCTTTGGTGCTCATAATTCTACTTCAAGGACAGTTCAAGAATTTCACAGAACAGTTACCAATGTTGGTGATGGAAAAGCAACTTATGTGGCTAGAGTTGCTCGTAGTAAAGGCTTCCGTGTCCATGTTATCCCAAACAAGTTGGTGTTCAATCAGAAGAACGAGAAGAGAAGCTTCAAGTTGAGGATCGAAGTTGCCAGAATGACGAAATTAGAACAAGTGGCTTTTGGATATCTGAATTGGATGGATAGGAAGCACGTGGTTAGGAGTCCAATTGTAGCCACCACTCTCCAATTGAAATTCTAG 2229 0.3984 MSRISMLLCYITFLHLILTSFAFAHSHNYIIHMNISAMPKVFTTQHTWYQSIVSTKLIYSYTHVINGFSANFSPKELQSLKTSPGYISSVKDFSMKLYTTHSPHFLGLTPNIGAWHDSEFGRDVIVGLVDTGIWPESKSFNDYGITKIPSKWKGHCDFNSSVCNKKLIGAKFFNKGLLAMYPNRIATLHSTRDTDGHGTHVSSIAAGSRVDSVSFYGYAPGTASGIAPNARVAMYRVAYEQDLLSSDVIAAIDGAISDGVDVLSLSLGTDEGRLPLYEDPLAVATFAAIEKGVFVSAAAGNRGPGLNTLHNGIPWVITVAAGVMDRDFQGTLTLGDGTKITGLSLYKGTFPIHNVPIVFMGLCENVEELKKVKSKIVVCEGKNGTRFYQLVYYLDEAKVLGAVFISNDSHIEDTENRFASLIIDPKNGQVVKTYINSSSNSSIASLSFKKTVFGTKPAPTVDSYSSRGPSYNCPFVLKPDITAPGTSILAAWPANVPVKTILPYKYFSEFNLLSGTSMACPHVAGVAALLKGAHHDWTPAAIRSAIMTTSDIFDNIKEPIKIIGEDNKVGNIANPFALGAGHVNPNRAMDPGLVYDVGVQDYVNLLCALNYSQKNISVITRSSSNDCSKPSLDLNYPSVIAFFGAHNSTSRTVQEFHRTVTNVGDGKATYVARVARSKGFRVHVIPNKLVFNQKNEKRSFKLRIEVARMTKLEQVAFGYLNWMDRKHVVRSPIVATTLQLKF 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02927 742 FunFam Subtilisin-like protease SBT1.5 123 333 - -
Vifa2g02927 742 Pfam Subtilase family 121 579 IPR000209 GO:0006508|GO:0008236
Vifa2g02927 742 Pfam Peptidase inhibitor I9 29 97 IPR010259 -
Vifa2g02927 742 Pfam Fibronectin type-III domain 633 734 IPR041469 -
Vifa2g02927 742 Gene3D - 606 738 - -
Vifa2g02927 742 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 98 IPR037045 -
Vifa2g02927 742 PRINTS Subtilisin serine protease family (S8) signature 121 140 IPR015500 -
Vifa2g02927 742 PRINTS Subtilisin serine protease family (S8) signature 514 530 IPR015500 -
Vifa2g02927 742 PRINTS Subtilisin serine protease family (S8) signature 193 206 IPR015500 -
Vifa2g02927 742 CDD Peptidases_S8_3 96 551 IPR034197 -
Vifa2g02927 742 Gene3D Peptidase S8/S53 domain 123 602 IPR036852 GO:0004252|GO:0006508
Vifa2g02927 742 CDD PA_subtilisin_like 331 434 - -
Vifa2g02927 742 ProSitePatterns Serine proteases, subtilase family, serine active site. 515 525 IPR023828 -
Vifa2g02927 742 Gene3D - 325 453 - -
Vifa2g02927 742 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 734 IPR045051 -
Vifa2g02927 742 SUPERFAMILY Subtilisin-like 97 593 IPR036852 GO:0004252|GO:0006508
Vifa2g02927 742 ProSiteProfiles Serine proteases, subtilase domain profile. 103 589 - -
Vifa2g02927 742 ProSitePatterns Serine proteases, subtilase family, histidine active site. 197 207 IPR022398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02927 Vifa-Chr2 831520219 831522447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02927 1 738 Subtilisin-like Serine Gene Family AT5G67090 45.182 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02927 - - gmx:100786751 941.799