Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02924 ATGAGGATTAGTGGTAATAATAATCATTATAATCATCATCATAATTTGAGTTTTCATTTGCATATTCCACATCTTCACTTTCATCAAAACCATGAAAAGAATAAGGACATTCCAAAAGGGTGTATGGCAGTGATGGTGGGACAAGGAGAGGAGCAACAAAGGTTTGTGATTCCAGTGATTTACATCAACCATCCATTGTTTATGCAATTGTTGAAAGAAGCTGAAGAAGAATATGGATTTGCTCAGAAAGGACCTATCACCATTCCTTGCCATATAGAACAGTTTCGTACCGTCCAAGGAATGATTGATATGGAGAAATCTCACCACCATCATCATGCTTGGTGTTTTAAAGTTTGA 357 0.3641 MRISGNNNHYNHHHNLSFHLHIPHLHFHQNHEKNKDIPKGCMAVMVGQGEEQQRFVIPVIYINHPLFMQLLKEAEEEYGFAQKGPITIPCHIEQFRTVQGMIDMEKSHHHHHAWCFKV 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02924 118 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 32 97 IPR003676 GO:0009733
Vifa2g02924 118 Pfam Auxin responsive protein 31 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02924 Vifa-Chr2 830320626 830320982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02924 29 96 Calmodulin-binding Proteins AT5G20810 51.471 3.00e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02924 K14488 - gmx:100526867 191.045