Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g02836 | ATGGCTGTGAAGTACTCAAAACAGCTGCTGCTGATAGTGGTTGTTGCTGTCTTTCATACAAAAACAGCAACTCAACCGATGTCACATCCAAACTGTCCAACAATGTGCGGTTCGGTCACCATTCCTTTTCCATTTGGAACCACCAAAGATTGTTCCCTAGACAACACTTTTCTCATCAACTGCAACAAAACATCTTCAACTACATCAAACTCAACAGCACAAGTACCTTTCTTGCAAAAAACCAAACGAAGGGTCCTAAATATCTCACTCGATGGTGAACTGCGCGTTGCATGGCCAGTAGCCAGCAATTGCTACACTGAAAAGGTTGCACTCGTGGACCAAATACCTCAGGAGATCATCATGACTTATTTTCCCATCTCGCCAACTCGAAACAAGTTGATAGCAGTTGGCTGTGACACATTTGGAGTATTCTTCGCAATGGATTCTGGTGGAGAAAATTACACCAGTGGATGTGTGACTTTGTGTGGCAGGCGTGATGAAATTGTGGCCAATGAATCTTGTTCTGGCACTGGCTGTTGCGAAGTTTCAATACCCCACGGTCATGTGCTGACGAGAGTAGTCTATGCATCTCAAAGCATATTCAGTAACCACTCGTCAGTACATAACTTGGGTCCATGTGGTTATGCATTTTTGGTTGAAAATGGAAACTACAGGTTGGAATACAAAGACCTCTTCAAATTGGAGAAGGAGTTTCCAGTGGTGTTGGATTGGACAATAGGGAACAAAACGTGCGAGCAAGCAAAGAAGGATATTTCAAGTTATGCATGTAAGGCAGACAAAAGTACATGTTACCATGCAGGAACCAAAAAACCTGGTTATCTTTGCAAATGCCTTGAAGGATATCAGGGAAATCCTTACTTCAATCATGGTTGCCAAGGATATGAAGGAAACGGGAAAAATAATGGAACAAGATGCAGTCTCAAATCTAGAAAAGAGCTCATGTTGATCATTGCATTGAGTGTCTGTGTAAGCGTCGTAGGACTATTAATGGGAAGCATTTATGCATATTGGGTATTGAAGAAAATAAAGCTTATAAAACTTAAAGAACAGTTTTTTCAACAAAACGGTGGCTTACTCTTACAACAACAGCTAGTGAAGCATGGAGGATCAGTAGAAGCAACTAAAGTCTTCACTTCTGAAGAGCTAAATAAAGCAACTAACAACTTCGATGAAGAAAATATCATAGGCCAAGGTGGTCAGGGAACAGTTTACAAAGGAGTTTTACAGGATAACAGAACCGTAGCAATAAAGAAGTCGAAAATCAATGACTCGAGTCAGGTTGAGCCGTTCATCAATGAAGTGATCCTACTCTCTCAAATCAACCATAGAAATGTGGTAAAACTATTGGGTTGTTGTTTAGAGACAGAAGTCCCGTTGCTTGTTTACGAATTTGTTTCCAACGGTACTGTTTATGAGCATCTTCATGATCTAAACCAACCTTTAAAGCTTACTTGGAAAATAAGACTAAGAATAGCAAAAGAAACTGCTGGAGTCCTGGCATACTTGCATTCTGCGGCTTCTACACCGATCATACATAGAGATGTGAAATCCACAAATATACTACTAGATGACAATCTCACTGCAAAGGTTTCTGACTTTGGAGCTTCAAGGATAGTTCCTCTTGATAAATCTCAGATAACAACTCTAGTGCATGGGACAATGGGGTATCTTGACCCAGAATACTTCCACACAAGCCAGTTAACAGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTCTTAGCAGAGCTACTGACAGGAAAGAAAGCATTGTGTTTTGACAGGCCAGAGGTAGACAGAAACCTTGCACTGTACTTTGTTTCTTCAATGAAAGAAGGTCTGCTATTTCATATTCTGGACAAAAGTATTGATGAGCCGAATGTCGAGCATCTTAAGGAAGTTGCATTAATTGCAGAAAGGTGTTTAAGGGTGAAGAGTGAGGAAAGACCAACGATGAAAGAAGTGGCAATGGGACTTGAAGGAATATTAGTTATTGAAGAGCAGTGTTGGGGAAGTGACAATTTGCCTTCGGAAGAGACTGAAAACGTGCTCAATGGAGCACCATCTGTTATCAATGTCGAAGATAGTGTTGGCGGAAGTGGCATTAATTCTTCGTACTCATATGGTACAAACCAGATTTTGATGTCAGTGATTGGTGGAAGATGA | 2184 | 0.4084 | MAVKYSKQLLLIVVVAVFHTKTATQPMSHPNCPTMCGSVTIPFPFGTTKDCSLDNTFLINCNKTSSTTSNSTAQVPFLQKTKRRVLNISLDGELRVAWPVASNCYTEKVALVDQIPQEIIMTYFPISPTRNKLIAVGCDTFGVFFAMDSGGENYTSGCVTLCGRRDEIVANESCSGTGCCEVSIPHGHVLTRVVYASQSIFSNHSSVHNLGPCGYAFLVENGNYRLEYKDLFKLEKEFPVVLDWTIGNKTCEQAKKDISSYACKADKSTCYHAGTKKPGYLCKCLEGYQGNPYFNHGCQGYEGNGKNNGTRCSLKSRKELMLIIALSVCVSVVGLLMGSIYAYWVLKKIKLIKLKEQFFQQNGGLLLQQQLVKHGGSVEATKVFTSEELNKATNNFDEENIIGQGGQGTVYKGVLQDNRTVAIKKSKINDSSQVEPFINEVILLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTVYEHLHDLNQPLKLTWKIRLRIAKETAGVLAYLHSAASTPIIHRDVKSTNILLDDNLTAKVSDFGASRIVPLDKSQITTLVHGTMGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTGKKALCFDRPEVDRNLALYFVSSMKEGLLFHILDKSIDEPNVEHLKEVALIAERCLRVKSEERPTMKEVAMGLEGILVIEEQCWGSDNLPSEETENVLNGAPSVINVEDSVGGSGINSSYSYGTNQILMSVIGGR | 727 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g02836 | 727 | CDD | STKc_IRAK | 402 | 668 | - | - | |
Vifa2g02836 | 727 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 22 | 669 | IPR045274 | GO:0007166 | |
Vifa2g02836 | 727 | Gene3D | Transferase(Phosphotransferase) domain 1 | 472 | 679 | - | - | |
Vifa2g02836 | 727 | FunFam | Wall-associated receptor kinase 2 | 366 | 471 | - | - | |
Vifa2g02836 | 727 | Gene3D | Phosphorylase Kinase; domain 1 | 371 | 471 | - | - | |
Vifa2g02836 | 727 | SUPERFAMILY | Protein kinase-like (PK-like) | 379 | 663 | IPR011009 | - | |
Vifa2g02836 | 727 | Pfam | Protein kinase domain | 397 | 661 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g02836 | 727 | SMART | serkin_6 | 396 | 669 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g02836 | 727 | Pfam | Wall-associated receptor kinase galacturonan-binding | 32 | 95 | IPR025287 | GO:0030247 | |
Vifa2g02836 | 727 | ProSiteProfiles | Protein kinase domain profile. | 396 | 669 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa2g02836 | 727 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 517 | 529 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa2g02836 | 727 | FunFam | Wall-associated receptor kinase 2 | 472 | 688 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g02836 | Vifa-Chr2 | 792044385 | 792047164 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g02836 | 12 | 684 | Receptor kinase-like Gene Family | AT1G21230 | 43.733 | 0.0 | 546 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Vifa2g02836 | Pkinase | 1.2e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g02836 | - | - | mtr:25489730 | 967.222 |