Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02816 ATGTCTGAGGGAAGAGGCAGTGCATCTATGAACATAGTTACTATGATGATCTCACTATTGTGCCTTTTGTTTCTGGCTGAAAATATTAATGCAGAAACTCACATTGTTGGTGGAGCTAAGGGATGGACCTTCAACACTAAGAATTGGCCTAATGGAAAAGAATTTAGTGCCGGTGATGTACTCGTTTTCAACTATAATTCAAAGATACACAATGTGGTTGCCGTGGACAAAGTTGGATACACCAGCTGCAAAACGCCGGCGGCTGCCGGTTATGAAACGTTCAAGTCAGGGAGTGATCAGATCAAGCTAGAAAGTGGAGAGAATTACTTCATATGCAACTTTCCTGGTCACTGTCAAACTGGGATGAAGATTTTCATCAATGCAGCCTAG 390 0.4231 MSEGRGSASMNIVTMMISLLCLLFLAENINAETHIVGGAKGWTFNTKNWPNGKEFSAGDVLVFNYNSKIHNVVAVDKVGYTSCKTPAAAGYETFKSGSDQIKLESGENYFICNFPGHCQTGMKIFINAA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02816 129 CDD Plantacyanin 33 128 IPR041844 -
Vifa2g02816 129 Pfam Plastocyanin-like domain 42 122 IPR003245 GO:0009055
Vifa2g02816 129 PANTHER BLUE COPPER PROTEIN 26 127 IPR039391 GO:0009055
Vifa2g02816 129 SUPERFAMILY Cupredoxins 33 128 IPR008972 -
Vifa2g02816 129 ProSitePatterns Type-1 copper (blue) proteins signature. 106 122 IPR028871 -
Vifa2g02816 129 ProSiteProfiles Phytocyanin domain profile. 32 129 IPR003245 GO:0009055
Vifa2g02816 129 FunFam basic blue protein-like 32 128 - -
Vifa2g02816 129 Gene3D - 32 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02816 Vifa-Chr2 786265608 786266068 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02816 1 128 Phytocyanin Superfamily AT1G17800 38.129 1.86e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02816 - - gmx:100788635 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02816 2 786265608 786266068 Vifa2g02816 2 786265608 786266068 ECH