Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02811 ATGGTACCTCCGGGTCCAGGCCCATCACCTCCCATTGGGGGTGGTCCTCAGTCTCTCTCACCTTCACTAATGAGAACAAATTCAGGAATGTTGGGGGCTCAAGGGGCACCCATGTCTTTGCCGTCGTCTTTCCCTTCGCTTGTGTCTCCTCGTACTCAGTTCGGCAACATGAACATTCTAGGGAATATGTCTAATATGACTTCTATGCTGAATCAATCTTTCTCAAATGGAGTTCCGAATCACGGGCTCACGGGTCAAGGAAGTAGCCAACGTGGAGGGATTGAAAGTGGAGCTGAAGCAGGCCAACTTTCTAGTGTTGGCAATGGATCGAGCTTCACTACTTCTCCATCCTCATATGTACAAGCGAATATGGCCAATGCCAGTTCCTCTGGTCAAGTTCAGGGTCAACCATTTTCCAACCCTTCTAGCAACCAACTGTTGCCAGATCATCAGCATTCTCAACATCTTGATCCTCAAAATTTTCAACACAGCCAGCAGTCAATGCAACAGTTCTCTTCTCTGAATAATCAGCAGCAACAGCATTATCAATCAATGCGAGGAGGAATAGGTGGAAGTGGAATGGGACCAGTGAAGTTAGAGCCCCAGGTAAACAACGACCAACTTGGACAGCAACAGCTGCAATCAATGAGGAATCTTCCTCCAGTCAAATTGGAACAACAACAAATTCAAACAATGAGAACTCTGGCACCAGTTAAAATGGAGCCCCAGCATTGTGATCAACCGTTATATTTGCAACAACAACAGCAACAACAGCAACAACAATTCCTCCACATGTCGCGACAATCTTCTCAAGCTGCTGCTGCTCAGATTAATCTTTTGAACCATCACAGGCTTTTGCAGTTTCAACAACACCAGCAACAACAACTTTTAAAGTCAATGCCTCAACAACGGTCTCAATTACCACAACAATTTCAACAGCAGAATATGCCTGCGAGGTCTCCTGTGAAACCAGCATATGAACCGGGGATGTGTGCAAGGCGGCTGACACACTATATGTATCAGCAAAAACATAGACCAGAGGATAACAACATTGAGTTTTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCTAAGAAGAAGTGGTGTGTCTCTATGTATGGATGTAGCAGACAAACAACTGGAGTTTTCCCCCAGGATGTATGGCACTGCGAAATATGTAATCACAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTTCAAAGTAAAGTATGACAGTGGCACTCTGGAAGAGCTACTTTATGTTGACATGCCCCGCGAATATCATAATTCCTCTGGCCAGATTGTTCTAGACTATGCAAAAGCAATACAAGAAAGTGTCTTTGAGCAGCTTCGTGTTGTTCGTGATGGTCAACTTCGTATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAGTTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGACTGTTAATACCCCAGATTAGTCAGATTGGAGCGGTTGCCCAGAAATACCAGGCTTTAACTCAAAATGCAACGCCCAATATTTCTGCTCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCGTCAGCTCGTCAATTGGCTAAAACCCTAGAAGTTCCATTAGTTAATGATTTAGGATATTCAAAGACATATGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGCCTGAAAGACTTGATGGATTACAGTAGAGAAACAGTGACGGGACCTATGGAGAGCTTGACCAAGTTCCCTCGGAGAACAGTTAATTCATGCGGAGTTCGTAATCAAGCTCAACAGCATGAAGATCAGTTAAAACTACAGCAGCAGCAACAACAAATGATGATGCATAACTCAAATGGAGATCAAAATCCAGTGCAAGCTGCTGCCATGCAAATTGCATCCAGCAACGGCAGTCCATATGGAGGTTGTTCTGTTCAGATTCCATCTCCAGGTTCCTCCAGTACTGTGCCACAGGCCCAGCCAAATTCATCCCCTTTTCACTCACCACCGACACCATCCTCATCTAATAACCCTTCACAAACACCTCGTTCTACTTTAACGCCTCCCAATCAAATGAATACAACAAATTCAACAGCTAATGTTTCGCTCCAACAACATCAATATCAATCAGCTCTTTCTGGTGATGCTGACCCAAGTGATGCTCAAAGCTCAGTCCAGAAAATCATACAGGAGATGATGATGTCCTCGCAGATGAATGGTACTGGAGGAATGGCAGGTGTTGGTTCTCTAGGAAATGACTCAAAGAATGCAAGCAATAATCTGCCAATGAGTGTGAATGCAGGGCTCAATAATGGTAATGGCACACTGAATAATGATCCAGGTGCTGGTAGTTATGGAATGATGGGGTTTGGTCAATCCACTATGCCTAATGGAATGCGAGCTGCTATGGTAAATAATTCAATCACGAACGGAAGGGGAGGAATGACATCCATTGCGCGGGATCAAGCTATGAATCATCAACAGGATCTGTCAAACCAGTTGCTTAGTGGTCTAGGAGCAGTGAATGGTTATAATAATCTTCAATTTGATTGA 2577 0.4428 MVPPGPGPSPPIGGGPQSLSPSLMRTNSGMLGAQGAPMSLPSSFPSLVSPRTQFGNMNILGNMSNMTSMLNQSFSNGVPNHGLTGQGSSQRGGIESGAEAGQLSSVGNGSSFTTSPSSYVQANMANASSSGQVQGQPFSNPSSNQLLPDHQHSQHLDPQNFQHSQQSMQQFSSLNNQQQQHYQSMRGGIGGSGMGPVKLEPQVNNDQLGQQQLQSMRNLPPVKLEQQQIQTMRTLAPVKMEPQHCDQPLYLQQQQQQQQQQFLHMSRQSSQAAAAQINLLNHHRLLQFQQHQQQQLLKSMPQQRSQLPQQFQQQNMPARSPVKPAYEPGMCARRLTHYMYQQKHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGCSRQTTGVFPQDVWHCEICNHKPGRGFEATVEVLPRLFKVKYDSGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQISQIGAVAQKYQALTQNATPNISAPELQNNCNMFVASARQLAKTLEVPLVNDLGYSKTYVRCLQISEVVNSLKDLMDYSRETVTGPMESLTKFPRRTVNSCGVRNQAQQHEDQLKLQQQQQQMMMHNSNGDQNPVQAAAMQIASSNGSPYGGCSVQIPSPGSSSTVPQAQPNSSPFHSPPTPSSSNNPSQTPRSTLTPPNQMNTTNSTANVSLQQHQYQSALSGDADPSDAQSSVQKIIQEMMMSSQMNGTGGMAGVGSLGNDSKNASNNLPMSVNAGLNNGNGTLNNDPGAGSYGMMGFGQSTMPNGMRAAMVNNSITNGRGGMTSIARDQAMNHQQDLSNQLLSGLGAVNGYNNLQFD 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02811 858 MobiDBLite consensus disorder prediction 1 37 - -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 685 704 - -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 1 15 - -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 713 732 - -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 647 670 - -
Vifa2g02811 858 PANTHER LIM DOMAIN-BINDING PROTEIN 39 851 IPR029005 -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 71 201 - -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 759 783 - -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 602 630 - -
Vifa2g02811 858 Pfam LIM-domain binding protein 334 588 IPR029005 -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 747 783 - -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 71 186 - -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 647 704 - -
Vifa2g02811 858 MobiDBLite consensus disorder prediction 19 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02811 Vifa-Chr2 782624791 782629628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02811 8 858 C2H2 Transcription Factor Family AT1G43850 54.752 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02811 - - gmx:100799771 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02811 2 782624791 782629628 Vifa2g02811 2 782624791 782629628 ECH