Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02795 ATGGCGTCGAACACTGTTGGTAAAGTCATCAAGTGCAGAGCTGCGGTTGCATGGGAGGCTGGGAAGCCGCTGGTGATTGAAGAAGTAGAGGTGGCGCCACCACAGGCCGGTGAAGTTCGTCTCAGGATACTCTACACCTCCCTTTGCCACACTGATGTTTACTTTTGGGAAGCTAAGGGTCAAACTCCATTGTTTCCTCGTATATTAGGTCATGAAGCTGGAGGGATTGTGGAGAGCGTAGGTGAGGGTGTGACTCATCTCAAACCTGGGGATCAAGCACTGCCAATCAACCCTAATGCACCACTTGACAAAGTTTGCATTCTCAGTTGTGGAGTATGCACAGGTTTTGGTGCTACTGTGAATGTTGCAAAACCAAAACCTGGCTCTTCTGTTGCTATCTTTGGACTTGGAGCTGTTGGCCTTGCTGCCGCTGAAGGGGCGAGGATCTCTGGTGCATCAAGAATCATTGGAATAGATTTATTCCCCAACCGATTTGAATTAGCTAAGAAGTTTGGGGTAACCGATTTCATAAACCCTAAAGATCATGACAAACCTGTTCAACAAGTAATAGCTGAAATGACAAATGGAGGTGTGGATCGTGCTGTTGAATGTTCCGGAAACATCCAGGCCATGGCCTCAGCATTAGAATGTGTCCATGATGGTTGGGGTGTTGCTGTACTTGTTGGACTTCCAAGCAAAGATGATACCTTCAAAACTCATCCTGCGAATTTCTTAAGTGAAAGGACTCTGAAGGGTACCTACTACGGAAACTACAAACCCCGCACTGATCTTCCTAATGTTGTAGAGAAGTACATGAAAGGAGAGCTGGAACTGGAGAAATTCATTACACACAGACTACCATTTTCAGAGATTAACAAAGCATTCGATTACATGCTGAAAGGGGAGTCCATCAGATGTCTCATCAAAATGGAGGAGTAA 939 0.4579 MASNTVGKVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLRILYTSLCHTDVYFWEAKGQTPLFPRILGHEAGGIVESVGEGVTHLKPGDQALPINPNAPLDKVCILSCGVCTGFGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGIDLFPNRFELAKKFGVTDFINPKDHDKPVQQVIAEMTNGGVDRAVECSGNIQAMASALECVHDGWGVAVLVGLPSKDDTFKTHPANFLSERTLKGTYYGNYKPRTDLPNVVEKYMKGELELEKFITHRLPFSEINKAFDYMLKGESIRCLIKMEE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02795 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 275 IPR036291 -
Vifa2g02795 312 PANTHER ALCOHOL DEHYDROGENASE 95 308 - -
Vifa2g02795 312 SMART PKS_ER_names_mod 21 308 IPR020843 GO:0016491
Vifa2g02795 312 FunFam Alcohol dehydrogenase class-P 115 253 - -
Vifa2g02795 312 SUPERFAMILY GroES-like 260 308 IPR011032 -
Vifa2g02795 312 Pfam Alcohol dehydrogenase GroES-like domain 37 95 IPR013154 -
Vifa2g02795 312 Gene3D - 250 312 - -
Vifa2g02795 312 SUPERFAMILY GroES-like 5 116 IPR011032 -
Vifa2g02795 312 Pfam Zinc-binding dehydrogenase 138 268 IPR013149 -
Vifa2g02795 312 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Vifa2g02795 312 Gene3D - 115 249 - -
Vifa2g02795 312 Gene3D - 7 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02795 Vifa-Chr2 777341974 777344049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02795 38 92 Monolignol Biosynthesis Gene Families AT4G37970 32.727 4.35e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02795 K18857 - gmx:100801918 382.874