Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02794 ATGTCTACCACTGTTGGTCAGGTCATCAAGTGCAGAGCTGCGGTTGCATGGGAGGCTGGGAAGCCGCTGGTGATTGAAGAAGTAGAGGTGGCGCCACCGCAGGCCGGTGAAGTTCGTCTCAAGATACTCTTCACCTCCCTTTGCCACACTGATGTTTACTTCTGGGAAGCTAAGGGTCAGACTCCGTTGTTTCCTCGTATTTTTGGTCATGAAGCTGGAGGGATTGTGGAGAGCGTAGGTGAAGGTGTGACTCATCTGAAACCAGGGGATAAAGCCCTGCCGATCAACCCTGAAGCACCACTTGACAAAGTTTGCATTCTAAGTTGTGGAATCTGCACTGGTCTTGGTGCTACTGTGAATGTTGCAAAACCAAAACCTGGCTCTTCTGTTGCTATCTTTGGACTTGGAGCTGTTGGCCTTGCTGCTGCTGAAGGGGCAAGGATCTCTGGTGCGTCAAGAATCATTGGGGTTGATTTAGTTTCCAGCCGATTTGAATTAGCTAAGAAGTTTGGGGTAAATGAGTTCGTCAACCCAAAAGAGCACGACAAACCTGTGCAACAGGTAATTGCTGAAATGACAAATGGAGGTGTAGATCGAGCTGTTGAATGTACCGGTAGCATCCAGGCCATGATCTCAGCATTTGAATGTGTCCATGATGGTTGGGGTGTTGCTGTACTTGTTGGAGTGCCAAGTAAAGATGATGCATTCAAAACTCATCCTATGAATTTTTTGAATGAAAGGACTCTTAAGGGAACCTTCTACGGAAACTACAAACCTCGCACTGATCTTCCTAATGTTGTAGAGAAGTACATGAAAGGAGAGCTGGAACTGGAGAAATTCATTACTCACAGAATACCATTTTCAGAGATTAACAAAGCTTTTGATTACATGTTCAAAGGGGAGTCCATCAGATGTATCATCAAAATGGATGAGTAA 936 0.4562 MSTTVGQVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDKALPINPEAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKEHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHRIPFSEINKAFDYMFKGESIRCIIKMDE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02794 311 Gene3D - 93 304 - -
Vifa2g02794 311 FunFam Alcohol dehydrogenase class-P 114 252 - -
Vifa2g02794 311 PANTHER ALCOHOL DEHYDROGENASE 94 307 - -
Vifa2g02794 311 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Vifa2g02794 311 Gene3D - 114 252 - -
Vifa2g02794 311 Pfam Alcohol dehydrogenase GroES-like domain 36 93 IPR013154 -
Vifa2g02794 311 Gene3D - 6 92 - -
Vifa2g02794 311 SUPERFAMILY GroES-like 259 307 IPR011032 -
Vifa2g02794 311 Pfam Zinc-binding dehydrogenase 137 267 IPR013149 -
Vifa2g02794 311 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 274 IPR036291 -
Vifa2g02794 311 SUPERFAMILY GroES-like 4 116 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02794 Vifa-Chr2 777321436 777323492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02794 37 91 Monolignol Biosynthesis Gene Families AT4G37990 38.182 9.88e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02794 K18857 - gmx:100783858 406.371