Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02786 ATGGAAAAGTGTTGGTTTGTCGGTGTGTTGATTGTTTTGGGTTATGTGTGCTTGTTGGGAGCAATAATTAGAGTTGAAGGGTACCCTATTGAAGATCTGGTTGTGAATCTGCCAAGGCAACCTAAGGTTAAATTCAGTCAATATGCTGGCTATGTTGATATTGATGTAAAGCATGGGAGGAGTCTCTTCTATTATTTTGTTGAGGCTGATCATCATCCTCACAAAAAGCCCCTCACCCTTTGGCTCAATGGAGGTCCAGGATGTTCTTCTATCGGAGGAGGTGCCTTTAGTGAATTAGGTCCATTTTATCCCACAGGTGATGGATATGGTCTAAGAAAAAATTCAAATTCTTGGAATAAAGCTTCAAATCTTTTGTTTGTGGAGTCTCCTGCTGGAGTTGGATGGTCATACTCAAATACAACTTCTGATTATAAGAAGAATGATGCCTCCACAGCTAATGATATGCTTTTGTTCATGTTAAAATGGTACGAGAAATTCCCTTCTTACAAATCAAAGGAGTTATTTCTTACAGGAGAAAGCTATGCAGGACATTACATACCTCAGTTAGCTAATGTTATTATTGATTATAATAATGATTCAACTGGTTTCAAATTCAATATAAAAGGAGTTGCTATTGGAAATCCTCTTTTAAATTTCAACCGTGATACACAAGCAACCTATGAATATTTATGGTCACATGGAATGGTTTCTGATGAAATTTATCTTACTCTTAAGAATGATTGCGACTTTAATCTAAATTATGACAACTTATCTAAATCATGTAAAGATGCTATGGTTGATGTACAAGGAATGGTTAGTGACTATGTAGACAATTACGATGTGATTCTTGATGTTTGTTACCCATCCATTGCTCAACAAGAACTAAGATTGAAAAAAATGGCTAATAAAACAAGTTTAAACATAGATATTTGTATTGGTTATGAGGTTGATTTTTACCTCAATCTTCCTGAAGTTCAAAAGGCTCTTCATGCTAATCGCACCAATCTAACATATCCATGGTCTCAGTGCAGTAGTGTTTTAGATTATTATGCACTGGATCATGATATAAATATCCTTCCAGTTCTGAAATGGATAGTACAAAACCATATTCCACTATGGGTTTATAGTGGAGATCAAGATTCAATTGTGCCATTATTAAGTACTCGTACATTTATCCGTGAGCTTGCAAATGATCTAAAATTCAAGATTACAGATCCATATAGAGTTTGGTTTCACAAGGGACAGGTTGGAGGTTGGGTAACTGAGTATGGAAATTCATTGACTTTTGCCACTGTAAGAGGATCTGGTCACATGGTGCCATATACACAACCTTCAAAAGCATTGCACCTATTTAGTTCATTTGTAAGTGGCAGGAGATTGTCAAACACTACTCAGCCTTCAATTATTGATGAAATCTCCAAGTAA 1425 0.3586 MEKCWFVGVLIVLGYVCLLGAIIRVEGYPIEDLVVNLPRQPKVKFSQYAGYVDIDVKHGRSLFYYFVEADHHPHKKPLTLWLNGGPGCSSIGGGAFSELGPFYPTGDGYGLRKNSNSWNKASNLLFVESPAGVGWSYSNTTSDYKKNDASTANDMLLFMLKWYEKFPSYKSKELFLTGESYAGHYIPQLANVIIDYNNDSTGFKFNIKGVAIGNPLLNFNRDTQATYEYLWSHGMVSDEIYLTLKNDCDFNLNYDNLSKSCKDAMVDVQGMVSDYVDNYDVILDVCYPSIAQQELRLKKMANKTSLNIDICIGYEVDFYLNLPEVQKALHANRTNLTYPWSQCSSVLDYYALDHDINILPVLKWIVQNHIPLWVYSGDQDSIVPLLSTRTFIRELANDLKFKITDPYRVWFHKGQVGGWVTEYGNSLTFATVRGSGHMVPYTQPSKALHLFSSFVSGRRLSNTTQPSIIDEISK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02786 474 Gene3D - 358 457 - -
Vifa2g02786 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Vifa2g02786 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Vifa2g02786 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
Vifa2g02786 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Vifa2g02786 474 Pfam Serine carboxypeptidase 41 457 IPR001563 GO:0004185|GO:0006508
Vifa2g02786 474 FunFam Carboxypeptidase 358 457 - -
Vifa2g02786 474 Gene3D alpha/beta hydrolase 30 287 IPR029058 -
Vifa2g02786 474 Gene3D - 311 348 - -
Vifa2g02786 474 FunFam Carboxypeptidase 28 288 - -
Vifa2g02786 474 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Vifa2g02786 474 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Vifa2g02786 474 SUPERFAMILY alpha/beta-Hydrolases 25 464 IPR029058 -
Vifa2g02786 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 444 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02786 Vifa-Chr2 774875512 774878413 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02786 316 460 Calmodulin-binding Proteins AT2G22960 29.730 6.94e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02786 K16297 - gmx:100803335 743.421