Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02783 ATGGAGGGTAAGATTAGGACTTCAGAATTGATACCATTCATAGTGATGGTGATTATGGAAGGCTGCACTATAGCACTAACTATATTTGCAAAAACTGCACTAACTAATGGAATGAGTCCATTTGTATTCATTGTTTATACCAATGCTTTCGCCACTATAGTTTTGTTTCCTTCTTCCTTTTTACTAAACCATCAAAACAGAAAGGAGAAGCCACTTTTTACTTTCTCTTTGTTTATGAGATTCTTGCTCCTTGGTTTCACAGGAATAACTATGACTCAGCCACTTTTGTTTTTGGGTCTAAGTTACAGTTCTCCAATACTTGTATGTGCCATGAGCCACTTGATTCCAACCTTTACTTTTCTCCTCAATATCATTCAAAGGAAGGTAGAGTTGAATTTGAAAAACTCTGATACACAAATTCAAATAATTGGTATAATGGTATCATTTATGGGAGCAATAGTAGGTGAGTTCTTCAAAGGACCACTCATAAGACCCTCTTCTCACCACCTTAGATACACTAAGCAATTTTTTGTGTTTTCCTCAACACCTGAATTTTGGGTTTTTGGTGGCATTTTGCTTGCTGCTGCTTCTTTATCAGTTTCAATTTCCAACTTTATTCAGAAAGAAACTGTTCAGCAATATCAAGAACCAACGAAGATGGTTTCTTATTATACTTTGTTTGGGACAGTTCTTAGTGCAATAGTCTCATGCATATTTGAGAGTGATGTAAATTCTTGGAAGATAAAGAATAACATGGAGTTCATTCTCATTGTTCTAACGGGCATATTTGGAGGTGTGATTCGTCCAAATATTCAAATTTGGTTGAGTAGAATGAAGGGTTCACTTTATGTGCCACAGTTCAAGCCTTTTGGTATTGCTTTTGCTACTATTTTTGGAGTTTGTTTCTTTCCTAATAGTCTTCATTATGGAAGTGTGATAGGAGCAAGTGTGATTGGAATGGGGTATTATACAATATTGTATGGAGAATTCAAAGGAGATGAAGAAGACCAAAGTAGTGAGGAAAGTTCAGATTCTTTGGACAAGAAGATTCCTCTTTTGCAAGAAAATATGCAAGTGTAA 1080 0.3556 MEGKIRTSELIPFIVMVIMEGCTIALTIFAKTALTNGMSPFVFIVYTNAFATIVLFPSSFLLNHQNRKEKPLFTFSLFMRFLLLGFTGITMTQPLLFLGLSYSSPILVCAMSHLIPTFTFLLNIIQRKVELNLKNSDTQIQIIGIMVSFMGAIVGEFFKGPLIRPSSHHLRYTKQFFVFSSTPEFWVFGGILLAAASLSVSISNFIQKETVQQYQEPTKMVSYYTLFGTVLSAIVSCIFESDVNSWKIKNNMEFILIVLTGIFGGVIRPNIQIWLSRMKGSLYVPQFKPFGIAFATIFGVCFFPNSLHYGSVIGASVIGMGYYTILYGEFKGDEEDQSSEESSDSLDKKIPLLQENMQV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02783 359 PANTHER WAT1-RELATED PROTEIN 12 338 IPR030184 GO:0016020|GO:0022857
Vifa2g02783 359 MobiDBLite consensus disorder prediction 335 359 - -
Vifa2g02783 359 Pfam EamA-like transporter family 189 326 IPR000620 GO:0016020
Vifa2g02783 359 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02783 Vifa-Chr2 771896659 771898526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02783 1 353 Nodulin-like Gene Family AT1G70260 48.229 8.10e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02783 - - vum:124840741 515.768