Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02782 ATGGGCAATTATACAGTTCCTTTTGTAGGGATGATTCTTGCGGAGTTTGTTCAAGTTGCGTTAATCATGTTAAGCAAACGAGTCATGGCACAAGGAATGAACAGTTTAATATTCATTTTCTACTCCAATTCCATCGCTGCCCTTGTTCTTCTTCCATCTTCTTTCTACATCCACAGATTTCAACGTCCTCCTATCACGTTTTCTACCCTTTCTGGATTCTTCTTACTTGGACTACTTGGGTATTTAGCGCAGGTTTTTGGATATGCTGGGATTTACTACAGCTCATCAACACTTGCTACTGCCATGCTCAATCTTATTCCTGGTTTTACCTTCATACTTGCCGTTCTTTTTAGAATGGAACAATTAGATTGGAAAAGCTATAGCAGCCTAGCAAAATCATTGGGAACAATAGTGTCAATTGCCGGTGCTTTTATTGCGACTTTGTACAAGGGTGCTGCACTTCTGAAGGGACCATCATCACCTGCAAACGTATCTCATCAGCTAGCTTTCTCACAAGATACTAGTTGGATAATCGGCGGATCATTTCTTGCAGGTGATTGCGTGATGGCTTCAGCATTTCTAATAGTACAGGCTTCTATTATAAAGAAATATCCAGCAGGGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCTATCTGCCGTGACATGTTTGGTTTTGGAAAGAGACGTCAATGCTTGGAGCTTGGAACCCAAGCTAAGGTTGCTATCAGTTTTATACTCGGGAGTGTTTGGCTCTGCATTTCAAGTTGGTGTGACTACTTGGTGTTTGCACCAGACCGGACCTGTTTTTGTTTCCATGTTTAAGCCATTAGGAATTGTCATATCGGTGGTTGTAGGTGTTGTCTTCCTTGGTGATGCATTCTATCTCGGAAGTTTGATTGGTGCTACTGTGATTGTTATTGGGTTTTATTCTGTATTGTGGGGGAAATCCAAAGATATTGAAGCGAGAAGCTTGGAATCAAGAGGCAACCAGGCCCCTCTTTTGAAGGAAAACCGCAGTGAAGACATATAA 1041 0.4121 MGNYTVPFVGMILAEFVQVALIMLSKRVMAQGMNSLIFIFYSNSIAALVLLPSSFYIHRFQRPPITFSTLSGFFLLGLLGYLAQVFGYAGIYYSSSTLATAMLNLIPGFTFILAVLFRMEQLDWKSYSSLAKSLGTIVSIAGAFIATLYKGAALLKGPSSPANVSHQLAFSQDTSWIIGGSFLAGDCVMASAFLIVQASIIKKYPAGLIVVFFYCFFVAILSAVTCLVLERDVNAWSLEPKLRLLSVLYSGVFGSAFQVGVTTWCLHQTGPVFVSMFKPLGIVISVVVGVVFLGDAFYLGSLIGATVIVIGFYSVLWGKSKDIEARSLESRGNQAPLLKENRSEDI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02782 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 148 - -
Vifa2g02782 346 PANTHER WAT1-RELATED PROTEIN 6 323 IPR030184 GO:0016020|GO:0022857
Vifa2g02782 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 320 - -
Vifa2g02782 346 Pfam EamA-like transporter family 11 144 IPR000620 GO:0016020
Vifa2g02782 346 Pfam EamA-like transporter family 188 316 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02782 Vifa-Chr2 771890019 771892365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02782 6 345 Nodulin-like Gene Family AT5G40230 43.188 6.00e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02782 - - gmx:100804932 511.531