Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02763 ATGGTTCTGTGCTGCAAAGACTGTGCTGAAGGTGTAAGTGAACCTGTGAAATCCAAGAATAAAGAAACATCTATGAAAGCAAAAACTTCTACGAGTCGAGAAAAAAAAGACAAAATCGTCTTTTTCGACGATTGTAATCATTTTGCATTTGATTTTGAGGACCTTCTGAGAGCTTCTGCTGAGGTATTTGAAAAGGGTGTTTTTGGTACAACATATAGAGCTGCTTTAGATGATGCAACCACTGTGGTGGTGAAGAGATTGAAAGATGTTGCTGTAGGGAAAAAGGAGTTTGAACAGCATATGGAAGTTGTAGGGAAACTTATGCATGAAAATGTGGATGCAATAAGAGCTTATTATTATTCAAAGGATGAGAAACTTGTTCTTTCCGATTATTATCAACAAGGCAGTGTTTCTTCTATGTTGCATGGCAAGAGAGGGGAAGGAAGCACTTTTTCTCTAGACTGGGATAGCCGTTTAAGGATCGCGATTGGTACAGCAAGAGGCATTGCTTACATCCATTCTCAGCCTGGAAACCTAGTTCATGGAAACATAAAAACCTCAAACATTTTCCTCAACTCACAAGGATATGGTTGTGTATCTGACGTAGGTTTAGCAACATTGATGAGATCAGTACCTTTAGCAGACACTAGAGTAGCAGGATACCGTGCACCAGAACTAACTGACACGCGTAAAGCAACGCAGTCATCTGATGTATACAGTTTTGGTGTCCTGTTACTTGAGCTTCTAACTGGGAAGTCAGCTTTATATGCTGGGAAATCACCTTTAGATGCTACAGATGGTGAACAAATTGTTGACTTGGTTAGATGGGTGAAATCTGTTGTGAAAGAGGAATGGACTGCAGAGGTTTTCGATGTGGAGCTTTGGAAGTATTCAAATGTAGAAGAAGAAATGGTGGAGATGCTGCAGATTGGGATAAATTGTGCAGTAAAAAAGCCATATCAGAGACCACAGATGTCTGAAGTTGTGAGAATGATGGAAGGGATTAGTCCCGAGTCTAGATCAGAAGTTTCTACTCCAACTGTTTGTGCAACTTAA 1056 0.4015 MVLCCKDCAEGVSEPVKSKNKETSMKAKTSTSREKKDKIVFFDDCNHFAFDFEDLLRASAEVFEKGVFGTTYRAALDDATTVVVKRLKDVAVGKKEFEQHMEVVGKLMHENVDAIRAYYYSKDEKLVLSDYYQQGSVSSMLHGKRGEGSTFSLDWDSRLRIAIGTARGIAYIHSQPGNLVHGNIKTSNIFLNSQGYGCVSDVGLATLMRSVPLADTRVAGYRAPELTDTRKATQSSDVYSFGVLLLELLTGKSALYAGKSPLDATDGEQIVDLVRWVKSVVKEEWTAEVFDVELWKYSNVEEEMVEMLQIGINCAVKKPYQRPQMSEVVRMMEGISPESRSEVSTPTVCAT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02763 351 Gene3D Transferase(Phosphotransferase) domain 1 132 347 - -
Vifa2g02763 351 Gene3D Phosphorylase Kinase; domain 1 19 131 - -
Vifa2g02763 351 Pfam Protein tyrosine and serine/threonine kinase 63 331 IPR001245 GO:0004672|GO:0006468
Vifa2g02763 351 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 132 345 - -
Vifa2g02763 351 PANTHER OS05G0588300 PROTEIN 6 340 - -
Vifa2g02763 351 SUPERFAMILY Protein kinase-like (PK-like) 62 339 IPR011009 -
Vifa2g02763 351 ProSiteProfiles Protein kinase domain profile. 57 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa2g02763 351 FunFam pollen receptor-like kinase 1 24 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02763 Vifa-Chr2 766279969 766281341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02763 21 347 Receptor kinase-like Gene Family AT4G23740 56.936 5.06e-133 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vifa2g02763 PK_Tyr_Ser-Thr 9.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02763 - - mtr:25489776 483.796