Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02756 ATGGGAGATTTAAAGAGTTTGATACATGAGCTATTACAAGGATTGGAGTTGGCAAAAAAGCTTAGAATTTATCTCAATGTATCTTCTTCTTCTTCTTCCATTCATGAAACACGTGAAGTTTTGATACAAAAGATCATATCCACATTTGAAAAGGCACTTGAAATTGTTAACCGTAAAGGACGCGTTAATAATGTCGCTGAATCATCACAACAACAACAACAGCCGTCAGCCTCAGGAACACTAGCCATGATCAGAATGTTGGATTCGCCTCCTTTAAGCTCTAGTCCACGAAGTGAAGACTACGACAGAGATTTTAAGAACCGTGATGATCACAATACTCCAAGAAAAAGATGGACAAAACAAATTCGAGTTACACCAGGAATAGCACTGGAAGGTCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAAAAAGACATCCTTGGAGCCACTCATCCTAGAGGTTATTACAGATGCACTCACAGAAACATTCAAGGTTGTTTGGCAACAAAGCAAGTACAAAGATCCGACGAAGATCCAACAATCTTCGAAATCACGTACCGAGGAAACCATACATGCTCAATAGGAAGTGTTTCCAATGTGGCTGTTCCAATTCCAAGCATAAATCCAAATGCAAATCAAGAAACAAATGTGAACACAAACCAAGAACTAGTGAACCTGCGAACAGGTCTAACAGTTCAGACAGAGAATCTAGATTTCCTCGACCAATCATTTGCGCCATTAATCCATTTCCATTCAAACCATGTACTTGAAAGTAACTTTGCTGAAAACTTCAACTCCCCTGCAACTTCTGGAATAAGTCACTTCTCCATGTCTCCATCTCCTAGTGTGTTTCCGAATATGGCTAGTGAGATTATTCCACCAGCTACTTCTGTTGCAAACACACCAACTGATTTAGATTTTCCATTTCAACAGTTTCAATTTGACGGAGAGAACTTCACATTCGATAGCTCGCACTTTTTCCCTTGA 993 0.3958 MGDLKSLIHELLQGLELAKKLRIYLNVSSSSSSIHETREVLIQKIISTFEKALEIVNRKGRVNNVAESSQQQQQPSASGTLAMIRMLDSPPLSSSPRSEDYDRDFKNRDDHNTPRKRWTKQIRVTPGIALEGPLDDGYSWRKYGQKDILGATHPRGYYRCTHRNIQGCLATKQVQRSDEDPTIFEITYRGNHTCSIGSVSNVAVPIPSINPNANQETNVNTNQELVNLRTGLTVQTENLDFLDQSFAPLIHFHSNHVLESNFAENFNSPATSGISHFSMSPSPSVFPNMASEIIPPATSVANTPTDLDFPFQQFQFDGENFTFDSSHFFP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02756 330 MobiDBLite consensus disorder prediction 87 118 - -
Vifa2g02756 330 MobiDBLite consensus disorder prediction 97 117 - -
Vifa2g02756 330 Pfam WRKY DNA -binding domain 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g02756 330 ProSiteProfiles WRKY domain profile. 129 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g02756 330 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g02756 330 FunFam WRKY transcription factor 53 120 197 - -
Vifa2g02756 330 SUPERFAMILY WRKY DNA-binding domain 133 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa2g02756 330 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 268 IPR044810 GO:0003700
Vifa2g02756 330 Gene3D WRKY domain 128 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02756 Vifa-Chr2 760874720 760876030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02756 5 240 WRKY Transcription Factor Family AT4G23810 35.294 1.71e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vifa2g02756 WRKY 2.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02756 - - psat:127082223 567.77