Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g02755 | ATGGGAGATTTAAAGAGTTTGATACATGAGCTATTACAAGGATTGGAGTTGGCAAAAAAGCTTAGAATTTATCTCAATGTATCTTCTTCTTCTTCTTCCATTCATGAAACACGTGAAGTTTTGATACAAAAGATCATATCCACATTTGAAAAGGCACTTGAAATTGTTAACCGTAAAGGACGCGTTAATAATGTCGCTGAATCATCACAACAACAACAACAGCCGTCAGCCTCAGGAACACTAGCCATGATCAGAATGTTGGATTCGCCTCCTTTAAGCTCTAGTCCACGAAGTGAAGACTACGACAGAGATTTTAAGAACCGTGATGATCACAATACTCCAAGAAAAAGAAACACTCTATCAATTAGATGGACAAAACAAATTCGAGTTACACCAGGAATAGCACTGGAAGGTCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAAAAAGACATCCTTGGAGCCACTCATCCTAGAGGTTATTACAGATGCACTCACAGAAACATTCAAGGTTGTTTGGCAACAAAGCAAGTACAAAGATCCGACGAAGATCCAACAATCTTCGAAATCACGTACCGAGGAAACCATACATGCTCAATAGGAAGTGTTTCCAATGTGGCTGTTCCAATTCCAAGCATAAATCCAAATGCAAATCAAGAAACAAATGTGAACACAAACCAAGAACTAGTGAACCTGCGAACAGGTCTAACAGTTCAGACAGAGAATCTAGATTTCCTCGACCAATCATTTGCGCCATTAATCCATTTCCATTCAAACCATGTACTTGAAAGTAACTTTGCTGAAAACTTCAACTCCCCTGCAACTTCTGGAATAAGTCACTTCTCCATGTCTCCATCTCCTAGTGTGTTTCCGAATATGGCTAGTGAGATTATTCCACCAGCTACTTCTGTTGCAAACACACCAACTGATTTAGATTTTCCATTTCAACAGTTTCAATTTGACGGAGAGAACTTCACATTCGATAGCTCGCACTTTTTCCCTTGA | 1011 | 0.3937 | MGDLKSLIHELLQGLELAKKLRIYLNVSSSSSSIHETREVLIQKIISTFEKALEIVNRKGRVNNVAESSQQQQQPSASGTLAMIRMLDSPPLSSSPRSEDYDRDFKNRDDHNTPRKRNTLSIRWTKQIRVTPGIALEGPLDDGYSWRKYGQKDILGATHPRGYYRCTHRNIQGCLATKQVQRSDEDPTIFEITYRGNHTCSIGSVSNVAVPIPSINPNANQETNVNTNQELVNLRTGLTVQTENLDFLDQSFAPLIHFHSNHVLESNFAENFNSPATSGISHFSMSPSPSVFPNMASEIIPPATSVANTPTDLDFPFQQFQFDGENFTFDSSHFFP | 336 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g02755 | 336 | ProSiteProfiles | WRKY domain profile. | 135 | 203 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa2g02755 | 336 | Gene3D | WRKY domain | 134 | 202 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa2g02755 | 336 | MobiDBLite | consensus disorder prediction | 87 | 118 | - | - | |
Vifa2g02755 | 336 | Pfam | WRKY DNA -binding domain | 141 | 200 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa2g02755 | 336 | SUPERFAMILY | WRKY DNA-binding domain | 139 | 202 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa2g02755 | 336 | MobiDBLite | consensus disorder prediction | 97 | 117 | - | - | |
Vifa2g02755 | 336 | FunFam | WRKY transcription factor 53 | 126 | 203 | - | - | |
Vifa2g02755 | 336 | SMART | WRKY_cls | 140 | 202 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vifa2g02755 | 336 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 3 | 274 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g02755 | Vifa-Chr2 | 760874720 | 760876030 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g02755 | 5 | 246 | WRKY Transcription Factor Family | AT4G23810 | 35.662 | 6.33e-49 | 165 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vifa2g02755 | WRKY | 2.5e-27 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g02755 | - | - | psat:127082223 | 583.178 |