Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02755 ATGGGAGATTTAAAGAGTTTGATACATGAGCTATTACAAGGATTGGAGTTGGCAAAAAAGCTTAGAATTTATCTCAATGTATCTTCTTCTTCTTCTTCCATTCATGAAACACGTGAAGTTTTGATACAAAAGATCATATCCACATTTGAAAAGGCACTTGAAATTGTTAACCGTAAAGGACGCGTTAATAATGTCGCTGAATCATCACAACAACAACAACAGCCGTCAGCCTCAGGAACACTAGCCATGATCAGAATGTTGGATTCGCCTCCTTTAAGCTCTAGTCCACGAAGTGAAGACTACGACAGAGATTTTAAGAACCGTGATGATCACAATACTCCAAGAAAAAGAAACACTCTATCAATTAGATGGACAAAACAAATTCGAGTTACACCAGGAATAGCACTGGAAGGTCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAAAAAGACATCCTTGGAGCCACTCATCCTAGAGGTTATTACAGATGCACTCACAGAAACATTCAAGGTTGTTTGGCAACAAAGCAAGTACAAAGATCCGACGAAGATCCAACAATCTTCGAAATCACGTACCGAGGAAACCATACATGCTCAATAGGAAGTGTTTCCAATGTGGCTGTTCCAATTCCAAGCATAAATCCAAATGCAAATCAAGAAACAAATGTGAACACAAACCAAGAACTAGTGAACCTGCGAACAGGTCTAACAGTTCAGACAGAGAATCTAGATTTCCTCGACCAATCATTTGCGCCATTAATCCATTTCCATTCAAACCATGTACTTGAAAGTAACTTTGCTGAAAACTTCAACTCCCCTGCAACTTCTGGAATAAGTCACTTCTCCATGTCTCCATCTCCTAGTGTGTTTCCGAATATGGCTAGTGAGATTATTCCACCAGCTACTTCTGTTGCAAACACACCAACTGATTTAGATTTTCCATTTCAACAGTTTCAATTTGACGGAGAGAACTTCACATTCGATAGCTCGCACTTTTTCCCTTGA 1011 0.3937 MGDLKSLIHELLQGLELAKKLRIYLNVSSSSSSIHETREVLIQKIISTFEKALEIVNRKGRVNNVAESSQQQQQPSASGTLAMIRMLDSPPLSSSPRSEDYDRDFKNRDDHNTPRKRNTLSIRWTKQIRVTPGIALEGPLDDGYSWRKYGQKDILGATHPRGYYRCTHRNIQGCLATKQVQRSDEDPTIFEITYRGNHTCSIGSVSNVAVPIPSINPNANQETNVNTNQELVNLRTGLTVQTENLDFLDQSFAPLIHFHSNHVLESNFAENFNSPATSGISHFSMSPSPSVFPNMASEIIPPATSVANTPTDLDFPFQQFQFDGENFTFDSSHFFP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02755 336 ProSiteProfiles WRKY domain profile. 135 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g02755 336 Gene3D WRKY domain 134 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa2g02755 336 MobiDBLite consensus disorder prediction 87 118 - -
Vifa2g02755 336 Pfam WRKY DNA -binding domain 141 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g02755 336 SUPERFAMILY WRKY DNA-binding domain 139 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa2g02755 336 MobiDBLite consensus disorder prediction 97 117 - -
Vifa2g02755 336 FunFam WRKY transcription factor 53 126 203 - -
Vifa2g02755 336 SMART WRKY_cls 140 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa2g02755 336 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 274 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02755 Vifa-Chr2 760874720 760876030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02755 5 246 WRKY Transcription Factor Family AT4G23810 35.662 6.33e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vifa2g02755 WRKY 2.5e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02755 - - psat:127082223 583.178