Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02737 ATGGGTAGGGTTATCAGGGCACAACGTAAAGGTGCGGGATCAATCTTCAAATCCCACACCCACCACCGTAAAGGCCCCGCCAGATTCCGCAGTCTCGATTTCGGTGAAAGAAACGGCTACTTAAAGGGAGTAATCACCGACATCATCCACGACCCAGGTCGCGGTGCACCTCTTGCCAAGGTCACTTTCCGTCACCCGTTTAGGTATAAGAAACAAAACGAGCTTTTTGTTGCTGCTGAAGGATTATACACTGGGCAGTTTATTTATTGCGGGAAGAAAGCTACGCTTGTTGTTGGTAATGTTTTGCCGGTTAGGTCTATTCCTGAAGGAGCTGTGATTTGTAACGTTGAACACCATGTTGGTGATCCTGGTGCTTTTGCTAGGTGTTCTGGGGATTACGCTATTGTTATTAGTCATAATCCTGATAATGATACATCTAGGGTTAAGCTTTCATCTGGGGCCAAAAAGATTATTCCAAGTGGGTGCAGGGCTATGATTGGGCAAGTTGCAGGTGGAGGAAGGACAAAGAAGCCACTTCTTAAGGCTGGTAATGCTTACCATAAATTTAGAGTCAAGAGGAATTGTTGGCCTAAGGTTCGTGGTGTGGCTATGAATCCGGTTGAACATCCTCACGGAGGAGGTAATCCAGCAAGGTTCTTGAGGAAGCTTACAGAAGATGAAATGACATTTTTCTCACAATCTGCCTTAAATTATTCCAATTTGGCTCATGCTTATGCTGCTGAAAATGCAAAGCCACTGGACGAGACTGAATTTGTGAAAGTTCTTGGCAAGAAGGTTGCTCGTTCTGAAGATGGTTCAATACTCGATGCTGTTCAAGACATACCTCCAGAGATTAACCTCCCTGATAATGCTGTGGTAGATAAAGTTCTAAAGGCTTAA 900 0.4467 MGRVIRAQRKGAGSIFKSHTHHRKGPARFRSLDFGERNGYLKGVITDIIHDPGRGAPLAKVTFRHPFRYKKQNELFVAAEGLYTGQFIYCGKKATLVVGNVLPVRSIPEGAVICNVEHHVGDPGAFARCSGDYAIVISHNPDNDTSRVKLSSGAKKIIPSGCRAMIGQVAGGGRTKKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNPARFLRKLTEDEMTFFSQSALNYSNLAHAYAAENAKPLDETEFVKVLGKKVARSEDGSILDAVQDIPPEINLPDNAVVDKVLKA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02737 299 PANTHER RIBOSOMAL PROTEIN L2 2 215 IPR002171 GO:0003735|GO:0005840|GO:0006412
Vifa2g02737 299 Pfam Ribosomal Proteins L2, C-terminal domain 98 216 IPR022669 GO:0003735|GO:0005840|GO:0006412
Vifa2g02737 299 FunFam 60S ribosomal protein L8 90 169 - -
Vifa2g02737 299 Gene3D Ribosomal protein L2, domain 3 170 225 IPR014726 -
Vifa2g02737 299 Pfam Ribosomal Proteins L2, RNA binding domain 14 90 IPR022666 GO:0003735|GO:0005840|GO:0006412
Vifa2g02737 299 FunFam 60S ribosomal protein L2 1 86 - -
Vifa2g02737 299 Gene3D - 90 169 IPR014722 -
Vifa2g02737 299 SMART Ribosomal_L2_2 11 90 IPR002171 GO:0003735|GO:0005840|GO:0006412
Vifa2g02737 299 SMART Ribosomal_L2_C_2 96 231 IPR022669 GO:0003735|GO:0005840|GO:0006412
Vifa2g02737 299 Gene3D - 1 86 IPR012340 -
Vifa2g02737 299 ProSitePatterns Ribosomal protein L2 signature. 197 208 IPR022671 GO:0003735|GO:0005840|GO:0006412
Vifa2g02737 299 SUPERFAMILY Translation proteins SH3-like domain 99 219 IPR008991 -
Vifa2g02737 299 SUPERFAMILY Nucleic acid-binding proteins 1 97 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02737 Vifa-Chr2 753919118 753920017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02737 1 215 Cytoplasmic Ribosomal Protein Gene Family AT4G36130 89.767 3.09e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02737 K02938 - mnt:21409345 437.187