Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02725 ATGGCACTGTATAGAACTGGGCCATACCCAATTCTGGAGAGTAATAGCCTAGCTTATTCGCATAGAAATTTGTTTGTTTTACCTGTTCCTCTGCATTTCGCTAGACATAGACAATCATCTAATGAAGGCAAGAGAAAGCACAAAGGTTTATGCAGTTCATCACTACATGGAGCTGCATCTGCTTCTTCCATGGAGTCACATCAAGAGGATCTAAGTACCTTTTCCGTTTGCTTGGAGGAGGAAGCTGATCATGTTGTGAGGTTCAAAATGTCGGATTTTAAGGTTTTAGATCATGTTAGCATTGGCCTCGGTGGAAGGGCGGATGAGGTGGTTTTTGAAGGGGAGGTGAAGGATAGTGGTAGCCCTTTGTATAACACTCGAGTTATACTTCGACAGCTTTATAGTACCCAAGCTCAGCGTCGAGGAAAACGAGCAATAGAGGTATTGAAGAAGCTGGTTCGTCGTAAACTTTTGTATCATTCTTACTCAATGCAAGTTCTTGGCTATATCTCTTTGCCTGCAAGTGGTGATGGTGGTTCATTCATCTTAGTCCATGGGTATCATGGTAGTTTTTCTTTGAGACACTGGCTTCAACAGTCAGATTGGCTTCAAACCTTAGAGGCCACTCTTGCACTGGACGAAGAGTCTGTTAGGAAGGTAGGAGAAGATACAACTGGAGGTCCTGCGATTTCTAGGCAATTGCGTCTTATTCGAATGTTGATGAGAGATCTTCTAATTGGAGTAAATTACCTGCATAGTCATGGTCTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGACAGACATATCAAAGTAGGTATTCTGGGAAATGCTGCTGACTTTTGCGAGGATGGTTCAAATAGTGGCTCTATGGAAAACATGGACAGGCGACAAATGATGATTGCATTTGACATGAGATGCATGGGTTTCATAATGGCAAAAATGGTAATGGGAGAACTTATGGATCCTTTGATCTTTGCAAAGTTCAAATTGTTCCTCACAAAGGGGAATGATCCTTCATGTTTGCGACAGCTTATGCTGGAAATCCTTGGTAGAAATTCTCCAAATGGAAATGCTGGCTTACAAATGCTTGATAGGAACTGGGGTGCTGGTTGGCACCTTTTATCTTTATTGCTTGCAACCAAACCTTCTCAAAGGATAAGTTGTTTGGATGCTCTAAGGCACCCATTCCTTTGTGGGCCAAGATGGCGAGTAGTCCCGTCAATGGATATTATCAGATGGGGTCTGGGTTGTACTGCAATGCGTATTAGTGAGGAGTACATATATCGTCAGCCTCAGCGCAGTAGGCTTGCCCACTTCATTGACTTATTGGAGATGTTGAATCCTAATCCAAAGCCAAAGAATTGGCTGGAGCTGCTTCCAGGAAAATGGCGTCTATTGTACTGCACTGGGAAGCATGTTGGGCTGACTCTTCGACAACCTGCAGTCCGTGTACTAGTTGGAGATTTGCATTTATCTGTTAAAAGAGAATCAAAGTTGAAATCAAACCTTTCCTTCGTCTCTGACATTGGATTCTCAGTCTTGATTGGTCAGGACTGGCCTCATGACAAGGCTGGTAAAAGAGGAAGAGTGCAGGTGAACTCTTCATTTACACTAAGAGCTGGGAGACGTTTATATCTGAAGCAAGACAATACCTCAGAGAAGCTCTCCTTTGGCCCTTCTGGCAACGAGGAGGCTTTAGCTCAGAAATTTACTAGCAAGAAATGGAGAAAAATAACCCCTTTCAAGGAGTTTCCATCAAGTCTCCCTGCAGCCAAGCTTGTGTCTGGTAATATTGATGTGACAATGAACCTTGATGATCCTTTAAATCAAAATATTGATACAGCAAAAAATGTTCTTCAAGAACTAAGAACACAAATTCCCCCTGAAATATTTGATCTGTCAAAGGTTGTGTGTGGAACTTATGTGGACTCAAGGCTGCTCGTTCTTCGAGGCGTTAATGGATCGGCTCTCCTATTTACAAGGTCTTTTACGGATAGCGACATTTCTAGCTAA 2031 0.4274 MALYRTGPYPILESNSLAYSHRNLFVLPVPLHFARHRQSSNEGKRKHKGLCSSSLHGAASASSMESHQEDLSTFSVCLEEEADHVVRFKMSDFKVLDHVSIGLGGRADEVVFEGEVKDSGSPLYNTRVILRQLYSTQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVLGYISLPASGDGGSFILVHGYHGSFSLRHWLQQSDWLQTLEATLALDEESVRKVGEDTTGGPAISRQLRLIRMLMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGILGNAADFCEDGSNSGSMENMDRRQMMIAFDMRCMGFIMAKMVMGELMDPLIFAKFKLFLTKGNDPSCLRQLMLEILGRNSPNGNAGLQMLDRNWGAGWHLLSLLLATKPSQRISCLDALRHPFLCGPRWRVVPSMDIIRWGLGCTAMRISEEYIYRQPQRSRLAHFIDLLEMLNPNPKPKNWLELLPGKWRLLYCTGKHVGLTLRQPAVRVLVGDLHLSVKRESKLKSNLSFVSDIGFSVLIGQDWPHDKAGKRGRVQVNSSFTLRAGRRLYLKQDNTSEKLSFGPSGNEEALAQKFTSKKWRKITPFKEFPSSLPAAKLVSGNIDVTMNLDDPLNQNIDTAKNVLQELRTQIPPEIFDLSKVVCGTYVDSRLLVLRGVNGSALLFTRSFTDSDISS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02725 676 Gene3D Transferase(Phosphotransferase) domain 1 229 405 - -
Vifa2g02725 676 SMART serkin_6 93 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa2g02725 676 Pfam PAP_fibrillin 438 663 IPR006843 -
Vifa2g02725 676 ProSiteProfiles Protein kinase domain profile. 93 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa2g02725 676 SUPERFAMILY Protein kinase-like (PK-like) 88 415 IPR011009 -
Vifa2g02725 676 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 401 649 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Vifa2g02725 PAP_fibrillin 4.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02725 - - gmx:100809306 1087.4