Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02721 ATGTATAGAGAGAATGGTCTTCTTTTCCCATGGCCATATTTGCACAATTTCTCTCAAGAGCTTCATCAACTTGAAGACTACTGCAAAACTCACAAGTTCAATGCTTCAATGAGTGACATTGTTCAGTTTTCTGCGATGTACGAGTATGATTTTGCGGCTGAAGGAGATTTGTTCAAAGCACCGGAGCCGATTATTGAAGAGTCAGAGATTGATCTGGATCCCATGACAGCAACCATCTCAATGATATCTTGTGACGAAGATATAAAATCCACAGATATTTCTATTCTTCAAAACGAACAGCTTCTCAATGATGTATTCTATGAATGCGAGAAGGATCTACTTGAAAAGACAGCAATGGAGTCACCACTCTCTGAGATTCTGGAAATTAATGCTCCACTACAGAACATCAATGAGAATACAGTTCAAGAGAACAAGCCACTTCCTGATATGGCATTATTACCGAAGAGCGTCAGCTCAGGAAGTTTAAGTTCGATGGATTGGATGCATGGATCTGCAATGAAACCTGCTTTCCTTGGTGTCCCGGGAATAGATTTTGACGCGGTTTATGGCATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGCAACGGTAATAATATGAAGACGGTCCAATCTTCCCGAGAGAGGCCCTTTTTTTGCAACAGCGAGGAGCGCTTACAAAAGCTCTCCCGATACAGGAACAAGAAGACAAAAAGGAATTTTGGGAGGAAAATCAAGTATGCTTGTAGGAAGGCTCTAGCTGATAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGAATGAAGAATGTGAGGCAAAGAGGGAATGA 834 0.4137 MYRENGLLFPWPYLHNFSQELHQLEDYCKTHKFNASMSDIVQFSAMYEYDFAAEGDLFKAPEPIIEESEIDLDPMTATISMISCDEDIKSTDISILQNEQLLNDVFYECEKDLLEKTAMESPLSEILEINAPLQNINENTVQENKPLPDMALLPKSVSSGSLSSMDWMHGSAMKPAFLGVPGIDFDAVYGMRRSFSEGDIKTLGNGNNMKTVQSSRERPFFCNSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECEAKRE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02721 277 ProSiteProfiles CCT domain profile. 227 269 IPR010402 GO:0005515
Vifa2g02721 277 Pfam CCT motif 227 269 IPR010402 GO:0005515
Vifa2g02721 277 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 159 271 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02721 Vifa-Chr2 750189795 750192734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02721 223 273 C2C2-CO-like Transcription Factor Family AT5G57660 50.980 2.18e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vifa2g02721 CCT 4.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02721 - - gmx:100814332 404.445