Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02707 ATGGGTAAGAAAGGAAGCAACTGGTTCTCATCAGTGAAGAAAGTTTTCAAGTCTTCTTCTAAGGACTCGCCGGTGCCGGAAAACAAGAAGGAAAAGGAAGAGAGTTGGCAGAATGAAGTAGCAGAGGAAGTATCTATGGAGCATTTTCCTGCATATAGTTCACCAGATATCACCAATGAAGGAAGTACCACATCGACACCAATGACGGAAGAAAGAAACCATGCTATTGCCTATGCAGTATCAGCAGCAGCAGCAGCTGAGGCTGCAGTGGCAGCTGCTAGAGTAGTGAGATTGTCTGGTTACGGACGTAACTCTAGGGGAGAAAGAGCAGCAATACTCATTCAATCACATTATAGAGGATACCTAGCTCGGCGTGCATTGCGTGCTTTGAAGGGACTAGTAAGATTACAAGCACTTGTGAGAGGACATAATGTGCGGAAGCAAGCACAAATGACAATGAGATGCATGCAAGCATTGGTGAGAGTACAAGGAAGAGTAAGAGCCCGCAGACTCCAATTGACTCATGAGAAACATCAAAGAACAGTTGAGGAAGAACAACAACATCATCCTATGATAACTGGTTGGGATTATAGGCGTCAAAGTAGCCAGAAAATCAAGGAAAAGGCTCTTCCACACACTTTCAACCGTCAGCAACAACAAAAGCAATATTTGCATATAGAACCAAGTGTTGATGATATTGAAAGCTATGTCACTGAACGTGAAAGAGCTCAATTGGATTGGAACTGGTTGGAACATTGGATGTTATCACAATCACACAATGTTAAGCACTTAGGATTGGCCCCAGATGAGACCCCACCATATACAACAACCACTGATGACATGTCTGAGGAAAAGACAGTTGAAATGGACATGATGGGCCTAATGAACCAAGAATATCATGAGTTAAGCCCAATATCTAAATACCACCAAAGACAGTACAGTGTACCAAGCTATATGGCCCCAACCCTATCTGCAAAGGCCAAGATTAGGAGTCAAGGCCCATCGAAACATCGGGCTTCATTTGGGTCTTACTGGAGCTCATCAAGGAGTCCTACAATTGGGCTGAGCTATGACTCATCCGGCTCTAGCGGGGCCACAGCTGCTCATGCGATAACAAGAAGCCCAAGCCCAAAAATGAATGGGATTCGCCTTCAATCTAAACGGATTTCGGGTGGTGAGGATTGGCCCATCCCTCCTGGAGGTCATGGCTGGACAAGATTTGATTGA 1227 0.4491 MGKKGSNWFSSVKKVFKSSSKDSPVPENKKEKEESWQNEVAEEVSMEHFPAYSSPDITNEGSTTSTPMTEERNHAIAYAVSAAAAAEAAVAAARVVRLSGYGRNSRGERAAILIQSHYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQGRVRARRLQLTHEKHQRTVEEEQQHHPMITGWDYRRQSSQKIKEKALPHTFNRQQQQKQYLHIEPSVDDIESYVTERERAQLDWNWLEHWMLSQSHNVKHLGLAPDETPPYTTTTDDMSEEKTVEMDMMGLMNQEYHELSPISKYHQRQYSVPSYMAPTLSAKAKIRSQGPSKHRASFGSYWSSSRSPTIGLSYDSSGSSGATAAHAITRSPSPKMNGIRLQSKRISGGEDWPIPPGGHGWTRFD 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02707 408 MobiDBLite consensus disorder prediction 15 40 - -
Vifa2g02707 408 Coils Coil 168 188 - -
Vifa2g02707 408 MobiDBLite consensus disorder prediction 389 408 - -
Vifa2g02707 408 Pfam Protein of unknown function (DUF4005) 297 340 IPR025064 -
Vifa2g02707 408 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Vifa2g02707 408 PANTHER IQ-DOMAIN 5-RELATED 1 360 - -
Vifa2g02707 408 Gene3D - 104 158 - -
Vifa2g02707 408 ProSiteProfiles IQ motif profile. 108 135 IPR000048 GO:0005515
Vifa2g02707 408 Pfam IQ calmodulin-binding motif 108 128 IPR000048 GO:0005515
Vifa2g02707 408 Pfam IQ calmodulin-binding motif 134 149 IPR000048 GO:0005515
Vifa2g02707 408 MobiDBLite consensus disorder prediction 23 40 - -
Vifa2g02707 408 SMART iq_5 129 150 IPR000048 GO:0005515
Vifa2g02707 408 SMART iq_5 106 128 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02707 Vifa-Chr2 745191078 745193582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02707 1 404 IQD Protein Family AT3G49260 43.841 1.03e-83 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02707 - - psat:127081873 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02707 2 745191078 745193582 Vifa2g02707 2 745191078 745193582 ECH