Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02695 ATGCAGTTATATCATCATCCGTTTGATTTGGACAGCCAGAAGGTGAGACTTACATTAGAAGAAAAGGGAATTGATTATACATCTTTCCATGCCAACCCTATAACTGGCAAGAACTTGGATTCCACACTCTTCCAGATGAATCCCAGCGGAAGCCTCCCTGTTTTCCAAAATGGATCTCACATCATTTATAAGACTATTGATATAATTCAGTACATTGAAAGAATTGCTGTGGTCTCCGCAGGGTCTGAGGATATCAGTAGCAATAGGAAGGAAGTGATTGAATGGATGCAGAAGATACAAGAATGGAATCCTAAATATTTTTCCCTCTCTCATATACCAGACAAACACCTAGTTTATGTTTCCAAGTTCATAAGGCGTGTGGTGATAGCTCGTATGTCGGAGTCCCCTGAATTAGCAGGTGCATACCATAGGAAGTTAAGAGAAGCCTATCAAACCGACGAAAAATTGAAAGACCCTGATGTTTTGAGAAGGAGCGAGGAGCATTTGGTTAGACTACTTGATGAAGCCGAAAGACAACTGAGTGAAACACCTTATTTGGCAGGCGAAGAGTTTACAATGGCCGATGTGATGCTCATTCCGGTTTTGGCTCGTTTGAAACTCTTGGATTTAGAGAATGAGTACATAACAGGGAGGCCAAATATTGCTGAGTATTGGATTTTGGTTCAGCAGAGGCCTAGTTACAAAAAGGTGATTGGTAAGCATTTTGATGGTTGGAGAAAGCACAAAACATTGTTCAAAACTTGGTGCTTTGTTCGAATTAGAAGTTTGCTTAAGCGGTACTAG 804 0.408 MQLYHHPFDLDSQKVRLTLEEKGIDYTSFHANPITGKNLDSTLFQMNPSGSLPVFQNGSHIIYKTIDIIQYIERIAVVSAGSEDISSNRKEVIEWMQKIQEWNPKYFSLSHIPDKHLVYVSKFIRRVVIARMSESPELAGAYHRKLREAYQTDEKLKDPDVLRRSEEHLVRLLDEAERQLSETPYLAGEEFTMADVMLIPVLARLKLLDLENEYITGRPNIAEYWILVQQRPSYKKVIGKHFDGWRKHKTLFKTWCFVRIRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02695 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Vifa2g02695 267 CDD GST_N_family 1 73 - -
Vifa2g02695 267 Coils Coil 162 182 - -
Vifa2g02695 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Vifa2g02695 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Vifa2g02695 267 Gene3D - 129 238 - -
Vifa2g02695 267 SUPERFAMILY GST C-terminal domain-like 145 241 IPR036282 -
Vifa2g02695 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Vifa2g02695 267 CDD GST_C_family 147 225 - -
Vifa2g02695 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 106 252 IPR010987 -
Vifa2g02695 267 Gene3D Glutaredoxin 1 101 - -
Vifa2g02695 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02695 Vifa-Chr2 720872658 720873772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02695 1 267 Glutathione S-transferase Gene Family AT1G77290 69.663 4.93e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02695 K22077 - gmx:100792543 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02695 2 720872658 720873772 Vifa2g02695 2 720872658 720873772 ECH