Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02693 ATGGGCTCTTGTGGTGAACCTGCAATTGTTGCTGATCCTGTTGGATTGTCTGTAATTGAGCAGCAGCAGCCGTTGAACTCGGGGTTACCGGAGTCGTGTTTGGATGATCCTTGTAATGTTTTAGACCTTGATGGTATGGGGGATGGTTTTATTGGGGAGGGTGGTGTAGGTTGTTCTGGAAGCTTTGTTGATGTTGTTAATACTGAGGAGTCTGGAGATGGTTTGAGAAATGAATGTGAGATTGATGATTTATTACAATTGGAGATAGGTGCTGAAGATGGTTGTCGGAATAGTTTGGGGGTTTGTTCTGAGGATATTGACGTTTCTGATTTTATAAGTGATGGATTGCACTCGGAGGGAAATTTTAAAGATGAAGGTAAGGTCGACCTGCCAAATGATTTGCAGACGGATTGTGGTGAACAGGGTGAGCAGAAGGATGAGAAGAGCGTTGTTTTATCGATGGCAGGAGATAATTCGGAAGTTGTGGAAGACAAGGATGATGGTGCTGATTTGATAGCAAGGGCTGTCAGCTGTGTGCTTGGCACCGGTCATTCTGACGTTTCCCTTGAGTCGGATTTCATGAGAGATTGGCTAGTTGATTGCATCCAGAAAAATGAGCCAGAGGGGCTTATGAGAAATGGGATGGAAGCCAATTGCTGGCAGATATCTTCTTCGTTGGACGTGGAAGAAGTGCCGTCAGGTGCTTTACTTATAGACACAAAACTAGAAAGCACAAGTGATAAGCTGCACGATCAAAAAGATGGTGTGGATTGTGACAGTGCCTGCGAAGAAAAGATAAGAGCCACTGTTGTTAAAGAAATCACTGATGATTCACATGTAAAATCATCACCCTCACCTGATTTTCGTAACAACTTGAGGAATTCACCCGTAGTTGATTCACTATGTCAGCCTGCCTTGTTGGATCCAGGGAGTGAATTGAAGAATGGCATATTGCAAATAGAAGATAATTTCTGCGTATTGAAGGATAATTCTGCAGATGGAACTGGTAACTCTACCATTCAGGAATCATTTTATCCAGAATCAGGCCAGTCCTCTTCTGTTTTAATCACCAGTACCTCTCCAAAGGATGTGCCAGATCTTCTTTCCAAGGGTAACAGTGTTTCCATCAAGGATACTTGTCCTGTAGACAATCCTGGACAGACAAATAATGATGGACAAGAAGCTGTTGAAGTTGATTATATCACTGAAAGCACACTGTTACCTTCTCAAAGTAACAGTCAAACAACCAAATTTGGTCGTAATACACAAACCAGAAAGGCTTCTAGAAAATCCACAAACAAAGCCAGTGCAACACATTCAAGCGGGGGTATGAAGTTAAATTTAGAGGCTGTTAGGAAGAAAAGAAGTTGTTTATCCAAACCAGCTAGATCATCTGCCTGGGGATTGCTGGGGAATGTTGAACAGTTTTTTCAGTATGAAAATGAGCTTGATGTTAATGAAGCCATGTGCCAGGATGTTGGAAAGGCTAGAAACAACTGTCAAGGTGGGAAAACAACTAAGAATGATACAATTTCTAGCTCATTAAGTTCAATTCCAAAGGATAATGTTTCAACTTCAACTACTCGTTTTCGTCTGAAGATCAAGTTTGGAAAAGAAAATGATTTACCGGCGGCTTCTGCTTCCTACAAGGGGCCTGATTCAGGTTCTCAGAAAGTAACCAGCAATTCTGCAGATAAACTTTCTGTAGTGTTGGCATTAAACAGTATAGAATCATTCAGAAAAGACCCAGACAAGGATCCTGTGGTTCTAAATGGACACACTGTAAATAGCCAATTAGAAAATTCTAAAATAACAGAGAAGTCAGAAGGGGATGCAGAGGAACCATGTCACGCAGTTCCTCCAGAGACAGTGGTTGAAGTGTTAGTTAAGCCAATTAATAATTCAGCTGTAGATCCTGGAACATCACCCGATTCAGAAGTTATTGATTCAATTCCTGAAGTCCAGGCTGGAGAAAGACATGAAGATGTACATCTTGATGTGTTAGGTTCTTCTAACGAGTTAAATTCTAATTTGGATGTTACCTTCCGGAAGAAAGGGAAGAAGAAAGACAAGCTTATTGGTTCAGGCAATTGTATCACCGAGGATGGATCACATGGTCAACCAGGTAATAATGGAGCTATGCATTCAAAGAATCATAGACATAAGAACTGTAGTGACGTGGTTAGCTCTCTAGAATTCTCTACTTCCACCGAGCTAAGCAAATCTATGAAGAGTAAAGAATTGGCTGCAGAATCATTGCCCCTTTCTGGGGAGACTGTACTTGGAGGTTCCGCCAAGGCTTTGAAAGCTAAAAGTCACGTGACAGTTGGCGAAACATCTGGTGGTCATGAATTTTCTAAATTCCAGGGTTCCGAGGATTTGCCGTCTTCTACAAGACCTTTGGGTCGTAAACTACCTAGAAGTCTTGAACCTACTAGTAAATTTAGCAAGGAAAAAACCAATGCTTCTGACTTGACAAGCAGGAAAAAGACTACTACTAGACGCAAGGAGAAACAGAAAGAGCCAGTTAACAAAAGTGAAGTCAAGGGAAAGGGTCTCTCTCTCAAAGTTACACATGAAGTGGAAGATTGCCCTCATCCAGATGTAGATGGAAATCATAAGTTGGGCGCCGTTGTAAAAATTAATCCCAGTGACAACAGCAGAGTATCAGTCAATGCAGACATCATGCCTGGTTCGGGTTTGGGAGAACAACCTCAGTCACCGCGTAATGCATGGGTGAGTTGTGATGATTGCCACAAGTGGCGGCGTATTCCAGCTCTGCTTGCAGACCGGATTGATGAAACTAACTGCACCTGGACTTGCAAAGACAGCGGTGATAAAGCTTTTGCTGACTGTGCTATTCCTCAAGAAAAATCAAATGCAGAGATTAATGCAGAATTAGGATTATCATATGCATCTGGTGAAGAAGATGTACGAGACGACTCCAAAAATTATAAGGAATTGGAATATCGACTACCAATGGTTTCCCAAGGGTCATCTTTCACCCACATTTCCACCAACGAGTTTCTGCACCGCAAACCGAAAACTCAGACTATTGACGAGGTAATGGTTTGCCATTGCAAGCCACCTCCAGAAGGCAAGTTGGGATGTGGGGATGAATGTCTAAACCGGGTGCTTAACATTGAATGTGTGCCAGGAACTTGCCCATGCGGGGACCGTTGTTCTAATCAGCAGTTCCAAAATCGCAAGTATTCCAGACTGAAGTGGTTTAAATGTGGGAAAAAAGGTTATGGACTGAAGGCACTTGAGCGGGTAGCCAAAGGCCACTTTATTATTGAATACGTTGGAGAGGTCCTTGACACACATGCATATGAGGCACGTCAAAAAGAGTATGCTTTGAAGGGTCATAGGCATTTCTATTTTATGACCTTGAACGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAATTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAACTGTCGGACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGATTGTTTGCATTGCGGCATATCAAGCAGGATGAAGAATTGACGTTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGGTCACCTCATTGTCGAGGTTATATAGGCGGTGGTGATCCACTTAATGATGGGCTTATAGTTCAAGGCGATTCAGATGATGAATTTCCAGAACCATTGATGCTCACTGAAAATGGTGAAGTTGAGAACAGCACACCTATGCCCAATTACTATGATAATGTTGATACAGTGTCTTCTAGGCATTTATTAACAGACATGGATGTATTGGACAAGTCTACAACTGCTATATATGCAGATGGTTCTCCGGAGAAAGATAGTTCTATGAACCATGCCTCTGCTGTTTCCCTGTTGCACAGTTCAGTTGAAGTGGAAGACTCAAAAGGCAGTTTACCATCTTCTGATCGAATAGAAGAAATGTCTCAACAAATGGAGGATACAACAAGCAAACCCATGCCAGCTGTCAGCGAAGTGTTGTCGAATTCTACTGATAGTAGAAAATCCAAGTTTGAAATGGTTGAAGGCAGAAATGGTTTTTCACAATCACATCTGCCTGTGAAAACTCCTCAAAGAAGTGCTTCTGGTAAAAAGGCTAAAGTCAGTGCTAATGCTGCAAATGCCCTTACAGCTGAGGTGACAGTCAATCGATTGCCAGTGTCATCTATCAAACACAAAAAAATAGTCGAAGGTTCTTCCAATGCACGGTTTGAAGCAGTTCAGGGGAAACTTAATGAGTTGCTGGATGGAAATGGGGGAATAAGCAAAAGAAAAGATGCCACCAAAGGCTACTTGAAACTTTTGCTTCTCACCGTAGCTTCAGGTGATAGAATTAATGGTGAAGCAATTCAGAGCAATCGAGATCTTTCCATGATCCTTGACGCTCTTCTGAAAACAAAATCTAGAGCCGTGCTGAATGATGTAATTTGTAAAAATGGTTTACAGATGTTGCATAAGATCTTGAAGCAGTACAGGCAAGACTTTAAAAAAATTCCAATACTTCGAAAGCTTCTTAAGGTCTTAGAGTACCTGGCAGCAGGCAAGGTTTTGACACCGGAACATATCAAGAGTGGCCCTCCTTGTCGTGGAATGGAGAGTTTTAGGGAATCAATGCTGTCTCTGACAGAGCACGATGACAAACAGGTTCATCAAATTGCTCGAAGCTTTCGAGACAGATGGATTCCAAGACATAGCAGAAAACGTGGCTATATGGACAGGGATGATAATAGGGAATCTCACAGAAATTTCAACAGTAACAGATTTTCAGTATCTCATAATCATAGGCAAGAGCGATTAAGACCTAAGGAAGGAATTGATTGTGGTCAGCAGTCAAATCCTGCGACAACTTCAACTTCAGTAGATGCTGGTGCCCAGGAGAGTTGCTCTACACTGTCTTTGGATGGAGTTGAGATCAAAGGGGAGAAAAAACGCAAGCGCAAAAGCCGATGGGATCAACCGGCCGAACCGAATTCATATTCTGAAGCTGTTATTGGCTCTACCAATGAAAGCCAGAGCATTAATGAAGAAATTCCACCAGGATTTTCATGTCCAATCCGGTCATTAAACAGTGCACTAAACTCTGGTGGTCCTGTTTTGTCAAATGCAAGTCATTCTGGATGGCCCTCTAGTTTGGTTACTGGTCAGCCAAAACAGAAATTCAATTCTCGTTTGCCTGTTTCATATGGAATGCCATGGTATGTTGCCCAGCAATACGGAACTCCTCATGCTGAAATCAAAGGGTGTTGGGTCACTGCTCCTGGCGTGCCTTTCAACCCATTTCCTCCATTACCCCCACATCCACGGGAAATCAAAGACTGTCAGCCTTCTAATACTAAGGGCATGGAAGTTGATCAACCTGCTGAAATTAAGCTACGGGAAACTGATGGTCTGGTTAATTGTTGCTCAGAATCAGATGATATGACTCCCAGCACAACTGGTGCTAAGTCTGAAGACACAAACCTTGAATGCGGGGATGATAAACACGACCCCAAGCGATTGAAGGGTGACTCCAATGATTTGGGAAAGGATTACTTTAGACAGCAGAAATGGAACAATTCAAAAATACATCGAACATGGTTCAAGAGGAATGCAGGGAAATGTAATGGGAACAACTCTAGTGGTGTTGTGTGCAGTGTAGATGTAGGAGATGTATCAAAAGAATCAAAAGTTAATAGTTATTCAGAGGATGCAGTAGAGATGAGACAGGTGGAAAATAATATTTATTAG 5769 0.4219 MGSCGEPAIVADPVGLSVIEQQQPLNSGLPESCLDDPCNVLDLDGMGDGFIGEGGVGCSGSFVDVVNTEESGDGLRNECEIDDLLQLEIGAEDGCRNSLGVCSEDIDVSDFISDGLHSEGNFKDEGKVDLPNDLQTDCGEQGEQKDEKSVVLSMAGDNSEVVEDKDDGADLIARAVSCVLGTGHSDVSLESDFMRDWLVDCIQKNEPEGLMRNGMEANCWQISSSLDVEEVPSGALLIDTKLESTSDKLHDQKDGVDCDSACEEKIRATVVKEITDDSHVKSSPSPDFRNNLRNSPVVDSLCQPALLDPGSELKNGILQIEDNFCVLKDNSADGTGNSTIQESFYPESGQSSSVLITSTSPKDVPDLLSKGNSVSIKDTCPVDNPGQTNNDGQEAVEVDYITESTLLPSQSNSQTTKFGRNTQTRKASRKSTNKASATHSSGGMKLNLEAVRKKRSCLSKPARSSAWGLLGNVEQFFQYENELDVNEAMCQDVGKARNNCQGGKTTKNDTISSSLSSIPKDNVSTSTTRFRLKIKFGKENDLPAASASYKGPDSGSQKVTSNSADKLSVVLALNSIESFRKDPDKDPVVLNGHTVNSQLENSKITEKSEGDAEEPCHAVPPETVVEVLVKPINNSAVDPGTSPDSEVIDSIPEVQAGERHEDVHLDVLGSSNELNSNLDVTFRKKGKKKDKLIGSGNCITEDGSHGQPGNNGAMHSKNHRHKNCSDVVSSLEFSTSTELSKSMKSKELAAESLPLSGETVLGGSAKALKAKSHVTVGETSGGHEFSKFQGSEDLPSSTRPLGRKLPRSLEPTSKFSKEKTNASDLTSRKKTTTRRKEKQKEPVNKSEVKGKGLSLKVTHEVEDCPHPDVDGNHKLGAVVKINPSDNSRVSVNADIMPGSGLGEQPQSPRNAWVSCDDCHKWRRIPALLADRIDETNCTWTCKDSGDKAFADCAIPQEKSNAEINAELGLSYASGEEDVRDDSKNYKELEYRLPMVSQGSSFTHISTNEFLHRKPKTQTIDEVMVCHCKPPPEGKLGCGDECLNRVLNIECVPGTCPCGDRCSNQQFQNRKYSRLKWFKCGKKGYGLKALERVAKGHFIIEYVGEVLDTHAYEARQKEYALKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRHIKQDEELTFDYNYVRVFGAAAKKCYCGSPHCRGYIGGGDPLNDGLIVQGDSDDEFPEPLMLTENGEVENSTPMPNYYDNVDTVSSRHLLTDMDVLDKSTTAIYADGSPEKDSSMNHASAVSLLHSSVEVEDSKGSLPSSDRIEEMSQQMEDTTSKPMPAVSEVLSNSTDSRKSKFEMVEGRNGFSQSHLPVKTPQRSASGKKAKVSANAANALTAEVTVNRLPVSSIKHKKIVEGSSNARFEAVQGKLNELLDGNGGISKRKDATKGYLKLLLLTVASGDRINGEAIQSNRDLSMILDALLKTKSRAVLNDVICKNGLQMLHKILKQYRQDFKKIPILRKLLKVLEYLAAGKVLTPEHIKSGPPCRGMESFRESMLSLTEHDDKQVHQIARSFRDRWIPRHSRKRGYMDRDDNRESHRNFNSNRFSVSHNHRQERLRPKEGIDCGQQSNPATTSTSVDAGAQESCSTLSLDGVEIKGEKKRKRKSRWDQPAEPNSYSEAVIGSTNESQSINEEIPPGFSCPIRSLNSALNSGGPVLSNASHSGWPSSLVTGQPKQKFNSRLPVSYGMPWYVAQQYGTPHAEIKGCWVTAPGVPFNPFPPLPPHPREIKDCQPSNTKGMEVDQPAEIKLRETDGLVNCCSESDDMTPSTTGAKSEDTNLECGDDKHDPKRLKGDSNDLGKDYFRQQKWNNSKIHRTWFKRNAGKCNGNNSSGVVCSVDVGDVSKESKVNSYSEDAVEMRQVENNIY 1922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02693 1922 FunFam Histone-lysine N-methyltransferase 971 1228 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1667 1691 - -
Vifa2g02693 1922 Pfam AWS domain 1035 1068 IPR006560 GO:0005634|GO:0042054
Vifa2g02693 1922 ProSiteProfiles Post-SET domain profile. 1197 1213 IPR003616 -
Vifa2g02693 1922 SMART PostSET_3 1197 1213 IPR003616 -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 405 444 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1363 1379 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1583 1640 - -
Vifa2g02693 1922 SMART set_7 1072 1195 IPR001214 GO:0005515
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 694 720 - -
Vifa2g02693 1922 FunFam Histone-lysine N-methyltransferase 904 965 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1311 1325 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1358 1379 - -
Vifa2g02693 1922 SMART shorttest3 1020 1071 IPR006560 GO:0005634|GO:0042054
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1653 1692 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 700 714 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1815 1832 - -
Vifa2g02693 1922 Gene3D - 902 965 - -
Vifa2g02693 1922 ProSiteProfiles AWS domain profile. 1020 1070 IPR006560 GO:0005634|GO:0042054
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1303 1333 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 775 852 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1622 1640 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 821 852 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 543 562 - -
Vifa2g02693 1922 PANTHER SET DOMAIN PROTEINS 430 1670 - -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 782 796 - -
Vifa2g02693 1922 SUPERFAMILY SET domain 999 1210 IPR046341 -
Vifa2g02693 1922 CDD SET_SETD2 1071 1213 IPR044437 GO:0010452|GO:0046975
Vifa2g02693 1922 Pfam SET domain 1083 1189 IPR001214 GO:0005515
Vifa2g02693 1922 ProSiteProfiles Zinc finger CW-type profile. 906 960 IPR011124 GO:0008270
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1833 1854 - -
Vifa2g02693 1922 Pfam CW-type Zinc Finger 912 958 IPR011124 GO:0008270
Vifa2g02693 1922 Gene3D SET domain 969 1219 IPR046341 -
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 405 443 - -
Vifa2g02693 1922 ProSiteProfiles SET domain profile. 1072 1189 IPR001214 GO:0005515
Vifa2g02693 1922 MobiDBLite consensus disorder prediction 1815 1854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02693 Vifa-Chr2 720858167 720870695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02693 1044 1213 Su(var)3-9 homologs AT1G73100 35.294 5.11e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vifa2g02693 SET 2.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02693 - - mtr:25489708 2568.5