Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02651 ATGGAGGTTGTGGATGGTAGAGAATTACAGTTACAACAACCACCACAGAACTTGAAGGAAGAACAACAACATTTTCATGTGTTGGCTGTAGATGACAGTGTGATTGATAGGAAGCTTCTAGAGAGACTCCTCAGAGGTTCTTCGTGCAAAGTTACATGTGTGGATTCTGGAGATAAGGCTTTGAAATATCTTGGACTCAATATTGATGAAGTTGATACAAATGATTCTTCCACCGAGACTATATTGGAATCATCTTCTCCTCTTCCTCTACCATTGCAGCTTCAAGAGGGAATTGGCAAAGTGAATTTGATCATGACAGATTATTGCATGCCTGGGATGAGTGGCTATGATTTACTCAAAAGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTTGTGATCATGTCTTCAGAAAATGTACCTTCCAGAATTACCATGTGCTTGGAAGAAGGTGCAGAAGAGTTTCTGTTGAAGCCTCTTCAGATATCAGATTTGCAGAAGCTTCAACCTTATTTTCTTAAATCTCTTGACAATTCTTCAGATGAACATGAATCTAGTAACAGTATTTCTACAGATTCTTCTGACAATGAAGATGTCATCAACAACAATAACAGTAATGGGATAAGCAAGAGGAAGGCCATGTCTCCTGAGCCTCCAGAGAGATCAAAGCCAAAAATGAAAGGGTTAACGGTGGTGGTGTAA 702 0.396 MEVVDGRELQLQQPPQNLKEEQQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLNIDEVDTNDSSTETILESSSPLPLPLQLQEGIGKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRITMCLEEGAEEFLLKPLQISDLQKLQPYFLKSLDNSSDEHESSNSISTDSSDNEDVINNNNSNGISKRKAMSPEPPERSKPKMKGLTVVV 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02651 233 Pfam Response regulator receiver domain 100 167 IPR001789 GO:0000160
Vifa2g02651 233 CDD REC_typeA_ARR 27 168 - -
Vifa2g02651 233 SUPERFAMILY CheY-like 25 168 IPR011006 -
Vifa2g02651 233 MobiDBLite consensus disorder prediction 177 233 - -
Vifa2g02651 233 MobiDBLite consensus disorder prediction 177 211 - -
Vifa2g02651 233 SMART REC_2 25 169 IPR001789 GO:0000160
Vifa2g02651 233 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 202 IPR045279 GO:0009736
Vifa2g02651 233 Gene3D - 26 202 - -
Vifa2g02651 233 ProSiteProfiles Response regulatory domain profile. 26 173 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02651 Vifa-Chr2 708061809 708064091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02651 20 175 Response Regulator Gene Family AT2G41310 57.962 1.84e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vifa2g02651 Response_reg 6.3e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02651 K14492 - gmx:100786187 305.064