Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02648 ATGGTAGAACGTGTGTTACTCACTCCTTCACTCCCATTACCATCTCGACCTTCACTTTCACCAACCACAATGGCTACTATTACTGGCGGCGCCGCCACTCGTATCATCCCCTCCGCCACCAGAGCCACCGTCTCACTCTCCTCTTCTTCCCGTTCCTTTTTCTCATTTTCATCCTCTTCTACTTCCGTTTCCTCGCTCAAATGCTTTCGCTCATCGCCTCGCATTTCTCACCTATTTCTCGACCAGCGAAGATCAGAGGTTCGTGTTTCGAGCGGACAGTTCGGAACGGTTTCGGCCTTGGCGTCTGATCCTGATCAGTTGAAGAGCGCTAGAGAAGATATCAAGGAGCTTCTCAGTACTAAGTTCTGTCATCCTCTTCTGATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCCAACGGTAGCTTAAGATTTGAAGCTGAGTTGAAACATGGAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTCCAGCCGATCAAAGACAAGTATTCAGGCGTGACATATGCAGACTTATTTCAGTTAGCCGGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCCAAAATTCCCATGAAATATGGAAGAGTAGATACCACTGGACCTGGCCAATGTCCTGAAGAAGGACGACTTCCTGATGCAGGCCCCCCTTCACCTGCTGATCATTTGCGTGAAGTTTTTTACCGAATGGGATTGGACGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGGAGGTCTAGACCAGACCGTAGTGGCTGGGGAAAACCTGAGACTAAATACACGAAAGACGGGCCAGGAGCACCTGGAGGACAATCCTGGACTGCACAATGGTTAAAGTTTGACAATTCTTACTTCAAGGACATCAAAGAAAAAAGGGATGAAGATCTATTGGTATTGCCAACTGATGCAGCTCTTTTTGAAGATCCTTCCTTCAAGGTATTTGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGAATTGTGATAGATGGTTCTCCAATTGTAAAGGGAGAGAAGTTTGTAGCAGCCAAGTACTCCTCTGGAAAGAGAGAGCTGTCCGATGCAATGAGGAAGAAGATACGAGCTGAATATGAGGCAGTTGGCGGAAGCCCAGATAAGGCTCTAAAGTCAAACTATTTCCTAAACATCATAATTGTTGTTGCAGTTTTGGCTATTTTGACATCCCTGCTTGGAAACTAA 1329 0.4635 MVERVLLTPSLPLPSRPSLSPTTMATITGGAATRIIPSATRATVSLSSSSRSFFSFSSSSTSVSSLKCFRSSPRISHLFLDQRRSEVRVSSGQFGTVSALASDPDQLKSAREDIKELLSTKFCHPLLIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEAELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDTTGPGQCPEEGRLPDAGPPSPADHLREVFYRMGLDDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKRDEDLLVLPTDAALFEDPSFKVFAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDGSPIVKGEKFVAAKYSSGKRELSDAMRKKIRAEYEAVGGSPDKALKSNYFLNIIIVVAVLAILTSLLGN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02648 442 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 110 234 - -
Vifa2g02648 442 Gene3D Peroxidase, domain 2 232 355 - -
Vifa2g02648 442 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 96 364 IPR044831 GO:0004601|GO:0034599
Vifa2g02648 442 FunFam L-ascorbate peroxidase T, chloroplastic 232 355 - -
Vifa2g02648 442 Gene3D - 110 363 - -
Vifa2g02648 442 CDD ascorbate_peroxidase 96 365 - -
Vifa2g02648 442 SUPERFAMILY Heme-dependent peroxidases 104 363 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 ProSitePatterns Peroxidases proximal heme-ligand signature. 254 264 IPR019793 -
Vifa2g02648 442 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 PRINTS Haem peroxidase superfamily signature 186 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 PRINTS Haem peroxidase superfamily signature 124 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 PRINTS Haem peroxidase superfamily signature 204 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 PRINTS Haem peroxidase superfamily signature 294 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 PRINTS Plant ascorbate peroxidase signature 323 347 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 PRINTS Plant ascorbate peroxidase signature 124 139 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 PRINTS Plant ascorbate peroxidase signature 204 216 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 PRINTS Plant ascorbate peroxidase signature 185 203 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 PRINTS Plant ascorbate peroxidase signature 103 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 MobiDBLite consensus disorder prediction 262 292 - -
Vifa2g02648 442 ProSiteProfiles Plant heme peroxidase family profile. 127 381 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa2g02648 442 Pfam Peroxidase 111 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02648 Vifa-Chr2 706973469 706979340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02648 127 360 Peroxidase AT2G18150 28.571 1.29e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02648 K00434 - aew:130776361 676.011