Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02642 ATGGAACTAAAAGAGGGTGTAGTAAACGTGAATGGAAAGAACTATGAAAAGACTACACACAAACTTCTGCTGGTTAGGGGAGGTGACGAATTGATATTTGGATCAGCTATCTATACTTTTTACCTACAAACTGCAAGGAGCGTAAGTGCTAATTTCCCTTTCTTTTTAAGTGATACTACAAAGAGTCTAATTATTGCATCGACTCGCATCCACCTTGATGCCAACTTCAAAGAAATCAGAAAATCTGCTCCTATGTTTACATCAGAGTCACAAAGGATCATACTGTCAGGCCCTGCTGAAATTTATCAGGAAGCTTTGTCCAAGGCTATTGCCAAGCACTTTGATGCCAGACTACTAATTGTAGATTTACTTTCATTTTCTGCTGGAACTGCTTTAAAGGAAGCCCCTTCTTCTAAAAGAATTTCAAAGCCTAAAATAGTAATAGATGTGCCTTTTATGAAACTAGGTTGTAGAGTATCATATTGGGGTGGCAACAATCCTGGGGAACCAATGGATGGCTCTAAGGGCATAATTCTCATATCTTTTCAAGATAATGAGTCTGCCAAAATTGGTGTGAAATTTGAGAAACCGTTTAAAAGAGGAATTGACCTTGGAGGTCTGTGCGAAGTCGGTTATGGTTATTTTTGTCGTGCTGTAGTGTTGAGCATGATTGAAACTCCACGTGAAGGGGATGATTTTCACAAAAAAATCTTGAACAGAATATTTGAGTTTGCTTTCGATCAAGGTGAAAAAGGTTCCCTTGTTGTCCTTGTTCAAAACATAGAGAAGGCTGTGGTGGGAGAATGTCGTGTTTTGAAAAATGCAATTGAAAGATTGCCCCCTAATATTGTGATAATGGCTTCCCACACCCAACTTTTTGAAGAGAAGCCTAGTAAAAAACAAGGGGATTCAAATTTTCTTTTAACTCAGGAGAAACCGAGTAGACAGCCTGAAGGAAGCAATAATTCCACTTCATTTATGAATCAAATTGGCGGTCTTTTCCCCATTAAGTTGATAATACAGCTTCCTAAGGATCATTTGTCACTATCTCGTTGGAAGGAGCAGTTGGAGCATCATGTTCAAAGTGCAAATGCGTTAAATGCTGTTATCATTCGCTCAGTTATAGACGAAAATGCTATGGATTGCCTAGACTTCAAGACTCTTTGTTTTAACGATCAAGCACTAACCCGAGAGAACGCACACAAAATTATTAGTTGGGCTTTAAGTTACCCCGAAAAGAACTTAAATAATTCAGTAAAGGATGTTTTTCTTGACGGTGAGTTTGAGGAGAAGTTGATGGCGGATGTTATTTCTCCGAGTGATATTGGAATCACTTTTAACGATATTGGAGCGTTACAAAGTGTGAAAGATACACTAAGGGAATTGATCATGCTTCCTCTTCAGAGGCCGGAGTTGTTCAGCAAAGGGCAACTTGCTAAGCCATGCAAGGGAATATTACTTTTTGGTCCTCCTGGCACCGGGAAAACAATGCTAGCAAAGGCGGTAGCAACTGAAGCTGGGGCAAATTTTCTCAATATTTCATTGTCCACCATTACTTCCAAGTGGTTTGGTGAAGCTGAGAAATATGTTAAAGCAATATTTTCTTTAGCTCACAAAATTGCACCAACCGTTATTTTTGTTGATGAGGCTCGCCTCGGATTTCCTTATACATGGAGGCTGTATGATATTTATCCTTCTGCATAG 1704 0.392 MELKEGVVNVNGKNYEKTTHKLLLVRGGDELIFGSAIYTFYLQTARSVSANFPFFLSDTTKSLIIASTRIHLDANFKEIRKSAPMFTSESQRIILSGPAEIYQEALSKAIAKHFDARLLIVDLLSFSAGTALKEAPSSKRISKPKIVIDVPFMKLGCRVSYWGGNNPGEPMDGSKGIILISFQDNESAKIGVKFEKPFKRGIDLGGLCEVGYGYFCRAVVLSMIETPREGDDFHKKILNRIFEFAFDQGEKGSLVVLVQNIEKAVVGECRVLKNAIERLPPNIVIMASHTQLFEEKPSKKQGDSNFLLTQEKPSRQPEGSNNSTSFMNQIGGLFPIKLIIQLPKDHLSLSRWKEQLEHHVQSANALNAVIIRSVIDENAMDCLDFKTLCFNDQALTRENAHKIISWALSYPEKNLNNSVKDVFLDGEFEEKLMADVISPSDIGITFNDIGALQSVKDTLRELIMLPLQRPELFSKGQLAKPCKGILLFGPPGTGKTMLAKAVATEAGANFLNISLSTITSKWFGEAEKYVKAIFSLAHKIAPTVIFVDEARLGFPYTWRLYDIYPSA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02642 567 Pfam ATPase family associated with various cellular activities (AAA) 485 550 IPR003959 GO:0005524|GO:0016887
Vifa2g02642 567 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 51 550 - -
Vifa2g02642 567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 443 550 IPR027417 -
Vifa2g02642 567 Gene3D - 444 549 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02642 Vifa-Chr2 705641476 705649247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02642 444 549 Calmodulin-binding Proteins AT3G56690 42.453 8.30e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02642 - - gmx:100800938 467.618