Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02641 ATGTGCAATATGTGCAATCGGATGCCAAAACACCGCATAGCAGCGGCGAGGGAGAAGATATCTACTACTGCAGATATTAAGTTGATTACTAGTGTCAGAGATTTCTTTCATCTCAGTTCTGATGACTTCTACAGTCAAGTTGTTGCCGAATTTGAAGATATTATCCCTGTCATTAAAACCTCCATTGCTGGCTCTAGACATGTTGGTCGTTATTGTTATTGTATCGGAAACAAGCATGGGCTTCTCTTGCCACATACTATCACACCTGAAGAATATCAGCATATAAGAAGAAGTCTACCTCATGCAACTGTTGTGCAGCGCATCCCAGAAGGATTGACTTGTTATGCGAGATTTATAGCATGCAATGACCATGTTGCCCTTGCGCACACTGAACTTCACCAGGAAGTCGAGGAGTTGCTCAATGATGTCCTTAAGGTAGAAGTTTTCAAGCCGAAGGATCCTTATAGTTATTTTTCTGGAACATACTGTGCCCTGTCCAACATAGGTGCTTTGATCCACCCTCATGCTTCCAAAGAAGTCTTGGATGAACTTTCTGAAAATCTTGAAGTTCCTTTTGAAGCTGGGACTGTCAATGATGGCAGCGTAACTTTATTTCCTGGCATGACAGTAAATGATTGGACAGCCTTTTGTGGTTCAACCACCACAAATGCAGAGCTGCAGGTGATTAATAGAGTTTTCAAGCTGAGGAAATGA 714 0.4216 MCNMCNRMPKHRIAAAREKISTTADIKLITSVRDFFHLSSDDFYSQVVAEFEDIIPVIKTSIAGSRHVGRYCYCIGNKHGLLLPHTITPEEYQHIRRSLPHATVVQRIPEGLTCYARFIACNDHVALAHTELHQEVEELLNDVLKVEVFKPKDPYSYFSGTYCALSNIGALIHPHASKEVLDELSENLEVPFEAGTVNDGSVTLFPGMTVNDWTAFCGSTTTNAELQVINRVFKLRK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02641 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 39 236 IPR002769 GO:0042256|GO:0043022
Vifa2g02641 237 SMART eIF6neu2 16 215 IPR002769 GO:0042256|GO:0043022
Vifa2g02641 237 Gene3D - 25 236 - -
Vifa2g02641 237 SUPERFAMILY Pentein 38 235 - -
Vifa2g02641 237 Pfam eIF-6 family 40 214 IPR002769 GO:0042256|GO:0043022
Vifa2g02641 237 Hamap Translation initiation factor 6 [eif6]. 1 237 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02641 Vifa-Chr2 705591976 705595654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02641 39 237 Eukaryotic Initiation Factors Gene Family AT3G55620 56.281 5.70e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02641 K03264 - cpap:110822188 231.491