Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02640 ATGGCCGAGGAGTCACAGGAGAAGATTGTGTTTGACGGAGAAGCCGCGTCGTCGCTGGTGAAGGAGCTGAGGGTGAGTTTCAGTTCTGGTAAAACGCGAAGTTATGAATGGAGAATATCGCAGGTGAAGGCTCTTTTGAAAATGATAGCTGAACAAGAGGATCAAATCGTTGATGCTCTTCGTTCTGACCTTGCTAAACCGCCACTTGAAACCGTCGTCTACGAGATTGGTATGTTTAAAAACTCATGTGAACTCGTGCTCAAGGAATTGAAACAGTGGATGACACCAGAAAAGGCTAAAACTTCAATCACAACTTTTCCGTCTTCGGCTGAAATCATACCTGAACCACTTGGTGTTGTGTTAGTTATCTCCGCATGGAACTATCCTTTTTTGCTGTCCCTTGATCCAGTCGTCGGAGCTATAGCAGCTGGTAATGTTGTGGTTCTAAAGCCATCAGAAATTGCTCCGGCTTCATCTTCACTGCTGGCGAAATTGTTAGGGGAGTACTTGGATAACTCGTCTATAAGAGTTGTGGAAGGGGCAGTGGATGAAACTACTGCGTTGCTGCAACAAAAGTGGGACAAAATTTTCTATACAGGAAATGGAAAAGTGGGACGGATAGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTTGTTCTGGAGCTTGGAGGAAAATCTCCAGCTGTTGTTGATTCAAATGTCAATTTTGAGGTTGCTGCAAGACGGATAATTTCCGGCAAGTGGGGCTGTAACAACGGACAAGCCTGCATTTCTCCTGATTATCTTATAACAACGAAAGAATTTGCTCCGAAATTGGTAGACGCTTTAAAGACTGAATTAGAAAACTGCTTTGGAAAGAGCCCAATAGAATCGAAAGACTTGTCGCGCATTGTAAACACTAACCACTTTGCTCGCTTGACAAAGTTCTTGGACGAGGATAAGGTTTCTGGCAAGATAGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTGCTCCAACTATTTTATTAGACGTTCCGCAAGATTCCCTGATAATGAGTGAGGAAATCTTTGGTCCATTGCTTCCAATAGTCACGGTGAATAAGCTGGAAGAAAGCTTCGATTTGATCAACGCGGGAACAAAGCCACTTGCGGCATATTTATTTACAAACGACAACAAGTTCAAGGAGCAATTTGTGAAGAATGTTTCTGCTGGGGGTTTGCTTATCAATGACACTGTCTTACATCTTGTGGTTCATACATTGCCATTTGGGGGAGTTGGTGACAGTGGAATGGGTGCATACCATGGAAAATTCTCCTTTGATGCCTTTACTCACAGAAAGGCAGTTCTTTATCGCGGCTTTACAGGCGATTCATCGATAAGGTACCCACCTTACACTGACATGAAGCAAAAAATGATGAAGGCTCTAGTAGCCGGTGATGTTCCTGGTGTAGTTCGTGCACTAATTGGATGGTCCTAA 1467 0.4363 MAEESQEKIVFDGEAASSLVKELRVSFSSGKTRSYEWRISQVKALLKMIAEQEDQIVDALRSDLAKPPLETVVYEIGMFKNSCELVLKELKQWMTPEKAKTSITTFPSSAEIIPEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNVVVLKPSEIAPASSSLLAKLLGEYLDNSSIRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPAVVDSNVNFEVAARRIISGKWGCNNGQACISPDYLITTKEFAPKLVDALKTELENCFGKSPIESKDLSRIVNTNHFARLTKFLDEDKVSGKIVYGGEKDESKLRIAPTILLDVPQDSLIMSEEIFGPLLPIVTVNKLEESFDLINAGTKPLAAYLFTNDNKFKEQFVKNVSAGGLLINDTVLHLVVHTLPFGGVGDSGMGAYHGKFSFDAFTHRKAVLYRGFTGDSSIRYPPYTDMKQKMMKALVAGDVPGVVRALIGWS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02640 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
Vifa2g02640 488 PIRSF ALDH 2 482 IPR012394 GO:0006081
Vifa2g02640 488 FunFam Aldehyde dehydrogenase 225 425 - -
Vifa2g02640 488 FunFam Aldehyde dehydrogenase 24 230 - -
Vifa2g02640 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
Vifa2g02640 488 SUPERFAMILY ALDH-like 19 453 IPR016161 GO:0016491
Vifa2g02640 488 CDD ALDH_F3FHI 16 447 - -
Vifa2g02640 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 443 IPR016162 GO:0016491
Vifa2g02640 488 PANTHER ALDEHYDE DEHYDROGENASE 15 477 IPR012394 GO:0006081
Vifa2g02640 488 Pfam Aldehyde dehydrogenase family 25 445 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02640 Vifa-Chr2 705569021 705571635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02640 11 488 Aldehyde Dehydrogenase Gene Family AT4G34240 64.854 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02640 K00128 - gmx:100783726 800.816