Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02637 ATGGCATCAGAACTTCAATTGCCACCTGGCTTCCGATTCCATCCAACGGATGAGGAACTCGTTATGCACTATCTCTGCCGCAAATGCACGTCGCAACCTATCTCTGTTCCGATCATCGCCGAAATTGATCTCTATAAGTACGATCCTTGGGAACTTCCTGGTTTGGCTTCGTACGGAGAAAAGGAGTGGTACTTTTTCTCGCCACGAGACAGGAAATATCCGAACGGTTCAAGGCCGAACCGGGCGGCTGGGTCTGGATATTGGAAAGCAACCGGGGCGGATAAACCCATAGGTAACCCGAAACCGGTTGGAATAAAAAAAGCGTTGGTTTTTTACGCGGGGAAAGCACCTAAAGGTGATAAAACCAATTGGATCATGCACGAGTATCGTTTGGCTGACGTAGATCGCTCCATTCGCAAAAAGAACAGTTTAAGGTTGGATGATTGGGTGCTTTGCCGTATTTACAACAAGAAGGGAACTATTGAGAAACAACCAAACGGTGTTTTTAGCCGGAAAATGGAACAGTCTGAAATTGAAGACAAGAAGCCGGATATTCTAACACGTGGCGGAGGTCTTCCACCGCATCCTCCGCCGGCGGGAATGAGGGATTATATGTATTTTGACACGTCGGACTCAGTTCCGAAGCTGCACACGGATTCGAGTTGCTCCGAACACGTGGTGTCGCCGGAGTTTGCTAGTGAGGTGCAAAGCGAACCTAAATGGAACGAATGGGAAAAGAGCCTTGAATTTCCTTATAATTACCTTGATGCCACTCTGAGCACCGGTTTTGGATCTCAATTTCCGAGCAATAATCATATGTCGCCGTTGCAGGATATGTTCATGTACTTGCCGAAAACCTTTTGA 864 0.4734 MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPISVPIIAEIDLYKYDPWELPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGNPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSIRKKNSLRLDDWVLCRIYNKKGTIEKQPNGVFSRKMEQSEIEDKKPDILTRGGGLPPHPPPAGMRDYMYFDTSDSVPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKSLEFPYNYLDATLSTGFGSQFPSNNHMSPLQDMFMYLPKTF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02637 287 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Vifa2g02637 287 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Vifa2g02637 287 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Vifa2g02637 287 FunFam NAC transcription factor 16 161 - -
Vifa2g02637 287 PANTHER NAC TRANSCRIPTION FACTOR 56 7 214 - -
Vifa2g02637 287 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02637 Vifa-Chr2 705241597 705242666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02637 1 287 NAC Transcription Factor Family AT1G01720 71.572 8.97e-149 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vifa2g02637 NAM 2.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02637 - - gmx:100805768 503.827