Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g02634 | ATGATGAATTCCATGTCCTACACTTTTTCTTGGGAACCATTTTGCGCCCCTCTTGATGAAAATGAGGTAAGATTCTATCAATCTTTTGAACAAGGGAATGTGGGGGATTTTGTTCGCATTAAGGTACGTGTTAAACATGAACTATGCATCACTCCCCAACAACACCCTTCTTTAATTTTACCTTTTGATCGGTTTTTATATGAACAAACCATGTTTGTACCTTACCAAGATTTTCTACAACATGCTTCGATATATATGCAAGTTCACTTTCCTAATGTCATCATCCCCCATGAGTTGACGTACACAATGCTGCCATTTTTAATGACATATGTAAGGGATGCACGAACTTCACCTTCCGGATTTTACTATGAAAGTCCTCGAATTCGTGTTTTTCCTCTAGGTTTGAATGTTTTTGTTCGAATGTTATTTGGTCATTGCGAGAATGTTTTCATCAATAACCTAGCTGCGAGGTTTGATTCCATTGGAGAGGTGCAATTTGTTCCGGCATCAAAGGAAGCCATTGAATCTCTTGAGAAGGTGAAGATTGAAAACCCTAATGCCATTGAAAATTGTAGTGTCTGTCAGTTTGAGTTCAATGCTGGAATGGAGGTCACAAAAATGCCTTGTAATCATCTGTATCATCAAGAATGTATTATTCAGTGGCTGAAAACGAGTCACATGTGCCCAATGTGTCGCTATCCAATGCCAACTTCAACCAGTGGCTGA | 726 | 0.3898 | MMNSMSYTFSWEPFCAPLDENEVRFYQSFEQGNVGDFVRIKVRVKHELCITPQQHPSLILPFDRFLYEQTMFVPYQDFLQHASIYMQVHFPNVIIPHELTYTMLPFLMTYVRDARTSPSGFYYESPRIRVFPLGLNVFVRMLFGHCENVFINNLAARFDSIGEVQFVPASKEAIESLEKVKIENPNAIENCSVCQFEFNAGMEVTKMPCNHLYHQECIIQWLKTSHMCPMCRYPMPTSTSG | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g02634 | 241 | CDD | RING-H2_PA-TM-RING | 191 | 232 | - | - | |
Vifa2g02634 | 241 | ProSiteProfiles | Zinc finger RING-type profile. | 191 | 232 | IPR001841 | - | |
Vifa2g02634 | 241 | SMART | ring_2 | 191 | 231 | IPR001841 | - | |
Vifa2g02634 | 241 | Pfam | Ring finger domain | 190 | 232 | IPR001841 | - | |
Vifa2g02634 | 241 | SUPERFAMILY | RING/U-box | 174 | 238 | - | - | |
Vifa2g02634 | 241 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 157 | 238 | IPR013083 | - | |
Vifa2g02634 | 241 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 143 | 236 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g02634 | Vifa-Chr2 | 703982313 | 703983038 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g02634 | 156 | 236 | C3H Transcription Factor Family | AT1G18760 | 34.146 | 7.83e-16 | 72.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g02634 | - | - | psat:127082836 | 443.736 |