Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02612 ATGACATCTTCACCAGTCGATACCTGCAAATTCGAGGATTTGCAGTTTGACATTGAGAAGAACGTGCCACAGGATGTAAGGTCTCAGTGGATTCTTAATGCTCCTGAGCCTCCAAGTCCTTGGCATGTGGCTGCAGATTCTGTTCTTTTTCCTATACTTGTTTGGGGAAGAAGCTACACTGCTGCTAAATTTAGGAAAGATTTTCTTGCTGGACTCACTATTGCTAGCCTATGTATCCCACAGAGCATAGGATATGCAACATTAGCAAACCTTGCTCCTCAATATGGACTTTATACGAGTGTTGTACCACCGTTGATCTATGCTGTAATGGGAACTTCGCGAGAGATAGCAATTGGTCCTGTCGCGGTGGTTTCGTTGTTGTTATCATCAATGGTGCAGAAACTAGTAGACCCTTCTACTGATCCAGTTGGTTACACAAAGCTTATTTTTCTTGCAACTCTCTTTGCTGGTATCTTTCAAACTTCATTTGGACTATTCAGGTTGGGGTTCCTTGTGGATTTTCTGTCACATGCTGCAATTGTTGGATTTGTAGCAGGAGCTGCAATTGTGATTGGGCTTCAACAGTTGAAGGGACTGTTTGGAATCACTCATTTTACAACCAAAACAGACATAATCTCTGTCTTGAAAGCTGTTTGGGAAGCATTTCATAATCCTTGGAACCCTCATAATTTTATCTTGGGAGGATCTTTCTTGGTGTTCATCCTAACAACTAGATTTCTGGGTAAAAGGAAGAAGAATCTGTTCTGGTTGGCATCAATTGCACCCCTTGTATCTGTCATACTGTCAACTCTAGTTGTTTTTCTAACTCGAGCCGATAAAAATGGCGTAAAAATTGTGAAACATGTCAAAGGAGGACTCAATCCAATCTCTATCAATCAGTTAGACTTTAACGGTCCACATGTTGTAGATGTTGCCAAAATCGGACTTGTTGTTGCTGTGGTTGCTCTTACCGAATCTGTTGCTGTTGGACGATCTTTTGCGTCGATCAAAGGATACCAGCTCGATGGAAACAAAGAGATGATGTCAATAGGCTTCACAAACATCATTGGATCTCTCACCTCGTGTTATGTTGCAACTGGTTCATTCTCTCGGACCGCGGTTAACTACGCAGCTGGATGTGAAAGTTTAATATCAAACGTTGTGATGGCAGTTACAGTGATGATATCACTGCAGTTTTTGACAAATCTATTGTATTATACACCAATTGCTATCATTGCATCAGTGATCCTCTCTGCTCTACCAGGACTCATAGACATAACTGAAGCATACAAAATTTGGAAAGTTGATAAACTTGACTTTCTTGCTTGCATCGGAGCCTTCTTCGGTGTACTCTTTGCTTCCGTCGAGATTGGTCTTCTAGTCGCGGTGGTAATATCTTTTTCAAAGATAATTCTGATATCGATTCGACCAAGCACAGAAACATTAGGAAAGCTTCCAGGAACTGATTTGTTCTGTGATGTTGATCAGTATCCTATGGCGATTCAAATTCCAGGTGTTATCATAATACGTATGAAATCCGCATTGCTTTGTTTTGCAAATGCGAATTTCGTTAAAGAAAGAATCATCAAATGGGTTACTCAAGAAGAATCAGAAGATGACAAGGGAAACTCAAAGAGTACAATTCAACTCGTAATTCTTGAAACCTCGAATTTGGTGAATATTGACACTTCTGGAATTGCTTCTTTGGAGGAACTGTACAAGAATTTGTCTTCACAAGGGAAACAGTTGGCGATTGTGAATCCGAGGTGGCAAGTGATACATAAGCTGAAGGTGTCGAAGTTTGTCGACAAAATAGGTGGGAGAGTTTGTCTGACTGTCGAAGAAGCTGTTGTTGCAGGGTGCAAGAGTAACCAGTTCTGA 1881 0.4094 MTSSPVDTCKFEDLQFDIEKNVPQDVRSQWILNAPEPPSPWHVAADSVLFPILVWGRSYTAAKFRKDFLAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLVDPSTDPVGYTKLIFLATLFAGIFQTSFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIISVLKAVWEAFHNPWNPHNFILGGSFLVFILTTRFLGKRKKNLFWLASIAPLVSVILSTLVVFLTRADKNGVKIVKHVKGGLNPISINQLDFNGPHVVDVAKIGLVVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNVVMAVTVMISLQFLTNLLYYTPIAIIASVILSALPGLIDITEAYKIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVVISFSKIILISIRPSTETLGKLPGTDLFCDVDQYPMAIQIPGVIIIRMKSALLCFANANFVKERIIKWVTQEESEDDKGNSKSTIQLVILETSNLVNIDTSGIASLEELYKNLSSQGKQLAIVNPRWQVIHKLKVSKFVDKIGGRVCLTVEEAVVAGCKSNQF 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02612 626 FunFam Sulfate transporter 31 476 623 - -
Vifa2g02612 626 Gene3D STAS domain 476 622 IPR036513 -
Vifa2g02612 626 CDD STAS_SulP_like_sulfate_transporter 497 606 - -
Vifa2g02612 626 Pfam Sulfate permease family 64 444 IPR011547 GO:0016020
Vifa2g02612 626 ProSiteProfiles STAS domain profile. 516 620 IPR002645 -
Vifa2g02612 626 PANTHER SULFATE TRANSPORTER 48 622 IPR001902 GO:0016020|GO:0055085
Vifa2g02612 626 ProSitePatterns SLC26A transporters signature. 93 114 IPR018045 GO:0008271|GO:0008272
Vifa2g02612 626 NCBIfam sulfate permease 51 608 IPR001902 GO:0016020|GO:0055085
Vifa2g02612 626 SUPERFAMILY SpoIIaa-like 501 617 IPR036513 -
Vifa2g02612 626 Pfam STAS domain 497 616 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02612 Vifa-Chr2 694482390 694486433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02612 24 619 Inorganic Solute Cotransporters AT5G10180 66.773 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02612 K17469 - gmx:100781327 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02612 2 694482390 694486433 Vifa2g02612 2 694482390 694486433 ECH