Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02495 ATGTCTTTATTTTCTCTCTTTCTCTTCACTCTTGTTTTCTTAATATCATACACAACTTCACAACTTCAAGAGTTTATAAGCATTGATTGTGGAGGAACAAGAAGTAACTATACTGACATAGCCACAGGGATAACATGGATTTCAGATTCTGAGATCATGAAAAATGGTGAGACAGTGAAAGTGAAAAACCCTAATGGGAATAAAGTTCAGTATGAGAAAAGAAGAGATTTTCCAACTGATAGTAGGAAATACTGTTATACACTTGAGACTGAGGAGAGGAGAAGGTATTTGGTGAGAGCAAGTTTTCAGTATGGGAGTTTGGAAAATGGAGATACATATCCTCAGTTTCAGCTTTATTTGGATGCTACTAAATGGGCTACTGTCTCTATTTATGATGATTCAAGGGTTTATGTTAAGGAAATGATTTTTAGGGCAGCTTTGAATTCTGTTGATGTTTGTGTCTGTTGTGCTACTACTGGTTCTCCTTTTATATCTACTCTTGAGCTTAGGCCTTTGAATCTTTCTATGTATGCTACTGATTTTGAGGATGATTTTTTCTTGAAAGTGGCTGCAAGAATTAATTTTGGTGCTCCAACTGAGGAGCCTGTTAGGTATCCGGAGGATCCATATGATAGAATATGGGAGTCCGATCTTGTAAAAAGACAAAATTATCTTGTTGGAGTAGCAACAGGCACAGAAAGAATTAGCACAACAAGGAACATAGGAATAGAGACAAGAGAATACCCTCCAGTTAAGGTGATGCAAACCGCAGTTGTTGGCACAAAAGGATTGCTTAGTTACAGACTCAACTTAGAAGACTTTCCTGCGAATGCTAGAGCTTATGCTTACTTAGCAGAAATTGAAGATTTGGGTCAGAATGAGACTAGGAAATTCAAATTGGAGCAACCTTATATACCTGACTATAGCAATGCAGTGGTGAACATAGCTGAGAATGCTAATGGTAGCTACACCCTTTATGAACCAAGTTACATGAATGTGAGTCTGGAATTTGTTCTTTCTTTCTCATTTAAGAGGACGCGCGATTCCACTAGAGGGCCTCTACTAAATGCTATGGAAATAAGCAAATATCAAGAAATTGCTTCGAAGACCTTCAAGCAAGATTCAAATTCTGTAAGTGCATTTGCTTCCTTGTCTGATGAAATCATCCCAAAGAACGAAGGGGATCCTTGTGTTCCAACTCCATGGGAGTGGGTGAACTGTAGTACCGCTACCCCTCCAAGAATTACAAAGATAAACTTATCAAGAAGGAATCTGACTGGTGAAATTCCACCAGAGCTCAACAACATGGAAGTCTTGGAAGAATTGTGGTTAGATGGAAACTCGCTTGCAGGAAAATTACCTGACCTGAGCAATCTTATCAATCTAAAGATTGTACATCTAGAGAACAATAAGTTGGACGGTTCACTACCTCCTTACCTCGGTAGCTTGCCAAGTTTACAAGCATTGTACATACAGAATAACTCATTTAACGGGGAAATACCAGCAGGATTATTGTCTTCAAAAATCACTTTCATCTATGAGTATAATCCTGAACTATATAGAAAGAGCAAAAAGCATTTTCAGTTGATAATAGGAGTTTCGATCGGAGTACTAGTGATTCTATTAGTCTTGTTCATAGGGAGTTTGTTGTTATTACATTACCTAAGGAGAAAGGCTTCTCAAAAGAAAAGTGATGAAAAAGGTATTCGGGGACGCAGTAAACATTTAACTGGATACTCTTTCGGCCGAGATGGGAATTTAATGGATGAAGGTACTGCATACTATATTAATCTCTCAGATTTGAGAGAAGCTACAGACAATTTTTCAAAGAAAATTGGAAAAGGAAGCTTTGGATCGGTCTATTATGGAAAAATGAAAGACGGAAAAGAGATCGCAGTTAAGACTATGACTGATCCATCAAGCCATGGGAACCATCAATTTGTAACCGAGGTAGCTCTCCTATCGAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAGTATCAGCATATTCTTGTTTATGAGTATATGCACAATGGCACTCTAAGAGATCACATTCATGAATGTTCGAGTCAGAAGCAATTAGACTGGTTAATTCGGCTTCGAATTGCAGAAGATTCTGCCAAAGGTCTTGAATACTTACACACGGGATGTAATCCTAGTATCATTCATCGAGACGTAAAGACGAGCAACATTCTCCTAGACATCAATATGAGAGCAAAAGTTTCAGATTTTGGACTCTCGAGACTTGCCGAAGAAGATTTAACTCATATATCAAGTGTTGCAAGAGGAACTGTGGGATACCTGGATCCTGAGTACTACGCAAATCAGCAATTGACTGAAAAGAGTGATGTATACAGTTTCGGAGTTGTTCTATTGGAACTGATATCTGGAAAAAAGCCGGTATCACCAGAAGATTATGGTCCAGAAATGAATATAGTTCATTGGGCAAGATCGCTAATTCGCAAAGGGGATATAATCAGCATTATGGATCCTTTGCTAATTGGAAATGTGAAAACTGAATCAATTTGGAGGGTTGCTGAAATAGCCATGCAATGTGTAGAACCACATGGTGCTTCTAGGCCAAGGATGCAAGAAGTGATTTTGGCTATACAAGATGCTTCTAAGATAGAGAAAGGAACAGAAAGTCAACTGAAATTATCACCCTCAGGTGATTCAAAACCACAATCTTCAAGGAAAACTTTGCTTACAAGTTTTCTTGAAATTGAGAGCCCTGATTTGTCTAATGGATGTCTTCCATCAGCAAGATAA 2787 0.3825 MSLFSLFLFTLVFLISYTTSQLQEFISIDCGGTRSNYTDIATGITWISDSEIMKNGETVKVKNPNGNKVQYEKRRDFPTDSRKYCYTLETEERRRYLVRASFQYGSLENGDTYPQFQLYLDATKWATVSIYDDSRVYVKEMIFRAALNSVDVCVCCATTGSPFISTLELRPLNLSMYATDFEDDFFLKVAARINFGAPTEEPVRYPEDPYDRIWESDLVKRQNYLVGVATGTERISTTRNIGIETREYPPVKVMQTAVVGTKGLLSYRLNLEDFPANARAYAYLAEIEDLGQNETRKFKLEQPYIPDYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFKRTRDSTRGPLLNAMEISKYQEIASKTFKQDSNSVSAFASLSDEIIPKNEGDPCVPTPWEWVNCSTATPPRITKINLSRRNLTGEIPPELNNMEVLEELWLDGNSLAGKLPDLSNLINLKIVHLENNKLDGSLPPYLGSLPSLQALYIQNNSFNGEIPAGLLSSKITFIYEYNPELYRKSKKHFQLIIGVSIGVLVILLVLFIGSLLLLHYLRRKASQKKSDEKGIRGRSKHLTGYSFGRDGNLMDEGTAYYINLSDLREATDNFSKKIGKGSFGSVYYGKMKDGKEIAVKTMTDPSSHGNHQFVTEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHECSSQKQLDWLIRLRIAEDSAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSPEDYGPEMNIVHWARSLIRKGDIISIMDPLLIGNVKTESIWRVAEIAMQCVEPHGASRPRMQEVILAIQDASKIEKGTESQLKLSPSGDSKPQSSRKTLLTSFLEIESPDLSNGCLPSAR 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02495 928 Gene3D Phosphorylase Kinase; domain 1 583 681 - -
Vifa2g02495 928 PANTHER OS07G0107800 PROTEIN-RELATED 458 879 - -
Vifa2g02495 928 ProSiteProfiles Protein kinase domain profile. 606 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa2g02495 928 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 409 505 - -
Vifa2g02495 928 Gene3D Ribonuclease Inhibitor 367 518 IPR032675 -
Vifa2g02495 928 SMART serkin_6 606 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa2g02495 928 FunFam serine/threonine-protein kinase PBS1-like 583 681 - -
Vifa2g02495 928 Pfam Malectin-like domain 28 362 IPR024788 -
Vifa2g02495 928 SUPERFAMILY Protein kinase-like (PK-like) 592 873 IPR011009 -
Vifa2g02495 928 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 682 889 - -
Vifa2g02495 928 CDD STKc_IRAK 612 873 - -
Vifa2g02495 928 Pfam Protein tyrosine and serine/threonine kinase 608 873 IPR001245 GO:0004672|GO:0006468
Vifa2g02495 928 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Vifa2g02495 928 SUPERFAMILY L domain-like 396 506 - -
Vifa2g02495 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
Vifa2g02495 928 MobiDBLite consensus disorder prediction 885 905 - -
Vifa2g02495 928 Gene3D Transferase(Phosphotransferase) domain 1 682 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02495 Vifa-Chr2 655528229 655533563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02495 10 928 Receptor kinase-like Gene Family AT1G67720 69.306 0.0 1285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vifa2g02495 Malectin_like 6.3e-86 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02495 - - gmx:100807148 1537.32