Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02484 ATGTATTTATCATCCGAAAAGCCTCGTCCAATCGATTTCTACAAAGAAGAATCCCGCGACATGATGATGGAAGTAGTAACCGCCACCGATCTCCAAGCGCCGCAGCTCCACCTCCACCAACAACAACCGCAAATGATTCTCGCCGCAGAGAGCAGCGGCGAAGACCCGGAGATGGAGATCAAAGCCCCCAAGAAACGGGCTGAGACTTGGGTACAAGACGAGACGCGAAGTCTCATTGGTCTACGACGCGAGATGGATTCGCTTTTCAACACTTCGAAGTCGAATAAGCATCTTTGGGAACAGATTTCGGCCAAGATGAGGGAAAAGGGTTTCGATCGGTCGCCGACTATGTGTACTGATAAATGGAGGAATCTTTTGAAGGAGTTTAAGAAAGCTAAGCATCATGATAGAGGGGGGAGTGGCTCTGGGAAAATGTCTTGTTATAAAGAGATTGATGAGATTTTGAGGGATAGGAATAAGTGTACTCAGTATAAGAGTCCTACTCCTACTTCTAAAGTTGAAGCTTCTTACATGCAGTTTTCTGATAAAGGTATTGATGATGCCAACATTTCTTTTGGGCCTGTTGAAGCTTCTGGGAGACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGACACCCTCTTGCCATTGCTGCAGCTGATGTTGCAGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACTCCCGGAAATGGTGGGGAAAGTCAGTCTTGTTGTGGAAGGGTTATATCAGTCAAATGGGGTGATTATACAAGACGGATAGGTATTGATGGCACTCCAGAAGCCATCAAGGAGGCAATTAGGGCCGCTTTTAGGTTGAGAACTAAACGTGCATTTTGGTTGGAGGATGAGGAACAGATTATCAGAAGTATTGACCGTGATATGCCTATAGGAAATTACACTCTTCACCTTGATGAAGGGATGGCCATTAAAGTATGTCTATATGACGAGTCTGACCATATCCCTGTGCATACTGAAGAGAAGATATTTTATACAGAAGATGATTACCGTGATTTTCTGGCACGCCGTGCTTGGACATGCCTTAGAGAATTTGACGGTTATAGAAATATTGACAACATGGATGATCTTCGACCTGGTGCCATATACCGAGGTGTGAGTTGA 1146 0.4503 MYLSSEKPRPIDFYKEESRDMMMEVVTATDLQAPQLHLHQQQPQMILAAESSGEDPEMEIKAPKKRAETWVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGGSGSGKMSCYKEIDEILRDRNKCTQYKSPTPTSKVEASYMQFSDKGIDDANISFGPVEASGRPTLNLERSLDHDGHPLAIAAADVAASGVPPWNWRETPGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRAFWLEDEEQIIRSIDRDMPIGNYTLHLDEGMAIKVCLYDESDHIPVHTEEKIFYTEDDYRDFLARRAWTCLREFDGYRNIDNMDDLRPGAIYRGVS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02484 381 PANTHER FI21293P1 46 379 - -
Vifa2g02484 381 CDD GT1 68 133 - -
Vifa2g02484 381 FunFam trihelix transcription factor GT-1 70 132 - -
Vifa2g02484 381 Pfam Myb/SANT-like DNA-binding domain 69 154 IPR044822 -
Vifa2g02484 381 Gene3D - 70 132 - -
Vifa2g02484 381 SMART sant 66 128 IPR001005 -
Vifa2g02484 381 ProSiteProfiles Myb-like domain profile. 62 126 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02484 18 380 Trihelix Transcription Factor Family AT3G25990 68.564 0.0 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vifa2g02484 Myb_DNA-bind_4 6.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02484 - - tpra:123907830 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02484 2 651782497 651788202 Vifa2g02484 2 651782497 651788202 ECH