Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02478 ATGAAGGAAGAAATCAAGTCGGAATTCGAAAAAGCTGGGTTCAATCTCGACGAAGAAGAAGAGATTATGAACAAATGTCTCACCTTTTGCATCAACTTCCGTCTCACTCCTATGGATCTCGTCTCAAGCTGGGAAATTTATTACCTTAACAGACAACTAGGTGAACCAATTGTACAAAATGCTGAAATGGAGGGTTTTCTGTTGCATCTACAGAATAATTTGAAAGAAGACATTATAAAGGGGGAAACTGGTTTGCATCTTTATTCCATCGGAGACGTAGAAATGATCACAAGTAACGACGATGTTACAAAGGATGATACTCCCACCACACCGACGAATAACCGTCAAGATGTTTATTCACCTATACATGATACACCATCTTTGTATGGGAATGTTTTAGCATCTGGAAAACCAGCAGATTTGGTGACACCTTTTTCCAAACGAACAGATAGGTTTGCAGTGAAGTTCAGCATCAACACCATATCTGATTCAGAGAATGGAAAACATGAACTTAACAGCGAGGAGGCAGAGAGTGATGAGTACAGTATTGTTAAGAAAGTCGTAACCCGAAAAAGGTGTTCGTTGGTGATTCATGGATCAGGGCTGAAACCAGGTTGCAGATTCATGTATGATAGAACTCAGGATAGGATTAACGCAATTGAAAACCGGATTCGAAAACATGCAAGAGCACTTGTAGCTTCTGGGCTCTATGAAGAACCAACAGACCCTACAATTGCGTCACCGAGAAATTTTTTTGCCGTTGGCATGATTTGCTGTGATGGAGAAGGCCGTCTTAATGAGAAATCTGTCATGTTACAGAGCAGTATTGAGCATTCTGGAGGGGAATGCATCCGCCTAGACTTACAACGTTTACATCATTATTCAGTTTTCCCTGGCCAGGTAGTTGGAATCGGAGGGCATAATCCTAGTGGGCATTGCCTAGTTGCATCTAAATTAGTTGATTATATACCTATCTCTGTTGCTAACGAGGATTTGAATCCTTCAAAGAGGCAAGCTATTGATAAGGAGAATCAGCTAACTGAACCTCTTTGTAATCAGAGAGAGTTATCAATGATTATTGCGGCGGGCCCTTTTACTACAACCGACAATTTGTTGTTTGAGCCTCTTGTAGAACTGCTGGCATATGCAAAGCGAAGACCACCACAGTTGCTTGTATTGCTGGGACCATTTATTGACTCTGAACACCCAGACATCAAGAAAGGAACAGTAGACATGGATTTTGATGACATATTTCGTTTTCAAGTATTGAAGAAGCTGGAAGATTACGTAGAAAGTATGAGTTCTGCCGTACGCGTTCTCGTTGTACCATCTATACGGGACGCCAACCATGATTTTGTTTTTCCTCAGCCTGCATTTGATATCAGTCTATCTCAGATAGCCAGTCTCCCTAATCCTGGAATCTTTGAGGCAAATGAGGTCAAAGTTGGTTGCTGCACTCTGGATGTTCTCAAGCAGATCAGTGGGGAGGAGATATCACGAACTGCAGCAGATGCAAAACCTATTGATCGTTTGAGTAGACTTACAAATCATATTCTTAACCAACAAAGTTTCTATCCACTTTACCCACCGGCAGAAAGTGTTCCATTGGACTTTTCTCTGGCACCAGAAGCCCTTCAACTCTCATCGGTTCCAGATGTTCTTATCTTACCTTCGGACATCAAGTACTTTGTCAAGGTTCTTAATAATGAAAGCGAAAAGACCATAAATGGGAAATGCATTGCTGTCAATCCTGGAAGATTAGCCAAAGGAGAAGGTGCGGGTACTTTTGTAGAACTTGATTATAGTGGAGGTCCTGATAAAATAAACGCTTCAATTGTGGCCATATGA 1848 0.414 MKEEIKSEFEKAGFNLDEEEEIMNKCLTFCINFRLTPMDLVSSWEIYYLNRQLGEPIVQNAEMEGFLLHLQNNLKEDIIKGETGLHLYSIGDVEMITSNDDVTKDDTPTTPTNNRQDVYSPIHDTPSLYGNVLASGKPADLVTPFSKRTDRFAVKFSINTISDSENGKHELNSEEAESDEYSIVKKVVTRKRCSLVIHGSGLKPGCRFMYDRTQDRINAIENRIRKHARALVASGLYEEPTDPTIASPRNFFAVGMICCDGEGRLNEKSVMLQSSIEHSGGECIRLDLQRLHHYSVFPGQVVGIGGHNPSGHCLVASKLVDYIPISVANEDLNPSKRQAIDKENQLTEPLCNQRELSMIIAAGPFTTTDNLLFEPLVELLAYAKRRPPQLLVLLGPFIDSEHPDIKKGTVDMDFDDIFRFQVLKKLEDYVESMSSAVRVLVVPSIRDANHDFVFPQPAFDISLSQIASLPNPGIFEANEVKVGCCTLDVLKQISGEEISRTAADAKPIDRLSRLTNHILNQQSFYPLYPPAESVPLDFSLAPEALQLSSVPDVLILPSDIKYFVKVLNNESEKTINGKCIAVNPGRLAKGEGAGTFVELDYSGGPDKINASIVAI 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02478 615 PIRSF DNA_pol_alpha_2 1 608 IPR016722 -
Vifa2g02478 615 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 602 IPR016722 -
Vifa2g02478 615 FunFam DNA polymerase alpha subunit B 1 76 - -
Vifa2g02478 615 Pfam DNA polymerase alpha/epsilon subunit B 359 565 IPR007185 GO:0003677|GO:0006260
Vifa2g02478 615 MobiDBLite consensus disorder prediction 102 119 - -
Vifa2g02478 615 Coils Coil 210 230 - -
Vifa2g02478 615 Gene3D - 338 511 - -
Vifa2g02478 615 Gene3D - 1 64 IPR043034 -
Vifa2g02478 615 FunFam DNA polymerase alpha subunit B 339 500 - -
Vifa2g02478 615 MobiDBLite consensus disorder prediction 100 119 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02478 3 615 Core DNA Replication Machinery Family AT1G67630 58.013 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02478 K02321 - gmx:100795306 919.842