Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02424 ATGATGAAATCCTTGAGGAAAATCTTATCCCTTCGATCGAACTACTGTATCAAACAAAGGAGTGAACATGGTGAAAACTCAGTAGCTTTGCCTGTGGAGTTGCCAAATTGCAACGATTGTGACCACATCGTTGTCGAGGACAGAAAGAACAGTACTACTACAGAAGGCGCCCATGTCGAATCTAAGCATGACGCTAATGCTGATAGTTCTTTTGTGCATGCTGTTATAAACATGGTGGGAATGCTCATAGGGTTGGGGCAACTATCAACTCCTTATGCTGTTGAAAAAGGAGGATGGGCGTCTGCATTATTGCTTATAGGACTTGGGGTAATATGTGCTTATACATCTCACATACTAGGAAAATGTCTTGAAAAGAATCCAACTTTAACAAGTTATGTGGATATTGGGAATCAAGCATTTGGAACAAAAGGAAGATACCTAGTTGCAACATTCATCTACATGGAAATCTTCATGGCACTTGTATCCTACACCATCTCATTACATGATAACTTGATCACAGTTTTTATAGGGACTCATCTCAAGATGAAATTTGTCACGTTAACAACGCCGCAAATCCTAACTTTGGTGGCAATTTTGATTGCTTTGCCTAGTTTGTGGATCAGAGATATGTCGTCTATATCTTTCCTTTCAACCGGTGGAATTGTTATGTCTCTTCTCATTTTCGTGTGTGTAGCCGCCACTGCGATTTTTGGTGGGGGTGAAGGTAGTAATAATCATAGTATACCTGTCTTCAAGCTACATAATATTCCATCAATATCTGGCATTTATGTCTTTGGTTTAGGAGGACATATTGTATTCCCTGATTTGTATAAATCCATGAAAGATCCCTCCAAGTTCACCAAGGTTTCAATTGTGAGCTTCACTATTGTTACAGCAGTTTACACTTCAATGGGATTCATGGGTGCAAAAATGTATGGAAATGATGTTCAATCTCAGATAACTCTCAGCTTGCCACCAAATAAAATTATAACAAAGATTGCTCTATGGGCAACCGTGTTGACACCAATGACTAAATATGCACTTGAATTTGCACCCTTTGCAATTCATCTTGAACATGCACTTCCAAATTCTTTGAATGCTAGGACAAAATTGGTAATAAGGGGTTGTGTGGCTTCAGTTTTGCTATTGATCATACTAGCCCTAGCTCTATCAGTGCCATATTTTGAACATGTGCTTAGCCTCACTGGTTCACTAGTTAGTGTAGCCATTTGTTTGGTTTTTCCAAGTATTTTCTATTTGAAGATTTTTTGGGGTAAAATTACAAGGTTTCTCTTGGTCCTTAATATTTCTTTAGTCATATTTGGGTTTCTTCTTGGTGGGATGGGTACCATTTCCTCCACAAAGTTAATATGGCAAACATTTATATCACATCATTCAACTTGA 1404 0.3832 MMKSLRKILSLRSNYCIKQRSEHGENSVALPVELPNCNDCDHIVVEDRKNSTTTEGAHVESKHDANADSSFVHAVINMVGMLIGLGQLSTPYAVEKGGWASALLLIGLGVICAYTSHILGKCLEKNPTLTSYVDIGNQAFGTKGRYLVATFIYMEIFMALVSYTISLHDNLITVFIGTHLKMKFVTLTTPQILTLVAILIALPSLWIRDMSSISFLSTGGIVMSLLIFVCVAATAIFGGGEGSNNHSIPVFKLHNIPSISGIYVFGLGGHIVFPDLYKSMKDPSKFTKVSIVSFTIVTAVYTSMGFMGAKMYGNDVQSQITLSLPPNKIITKIALWATVLTPMTKYALEFAPFAIHLEHALPNSLNARTKLVIRGCVASVLLLIILALALSVPYFEHVLSLTGSLVSVAICLVFPSIFYLKIFWGKITRFLLVLNISLVIFGFLLGGMGTISSTKLIWQTFISHHST 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02424 467 Pfam Transmembrane amino acid transporter protein 69 451 IPR013057 -
Vifa2g02424 467 PANTHER AMINO ACID TRANSPORTER 57 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02424 Vifa-Chr2 627092528 627094117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02424 37 465 Amino Acid or Auxin Permease AAAP Family AT5G16740 58.701 2.10e-160 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02424 - - lang:109342470 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02424 2 627092528 627094117 Vifa2g02424 2 627092528 627094117 ECH