Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02378 ATGAAAAACTACGACAATTTTGATTCCAACGACGTTCGTTGTTGTGATAGTGATACATCTGATGTTGAATTGAATGATGTTAAGGATGACAGTTATTCAGTATCTAGTGGGTATCAAAGTTCAAATGATGGTGATAGCGCTGATAATACTTACAATGATGATCTAGTTAAAGTAGATGTAGTTGTAGGTGATAGATTGGTGAATATTAACTCCATTAATGCTGATGAAATTCGTGCTATAGAATTTGGTATTGTTGATGAAGCTTATGAATTTTATTATCGGTATGATAAATGTAAAGGTTTTTCCATTAGAAAAAGTGATGTTAGGACAATAAGGCCCGAAGGTAGTAAAATAACAGTAATGAGGCTGTTTCTATGCAATAAACAAGGTTTAAGAGAGAATAAATACTTATATAGGATTGATAGGGAAATAGATCACAGACGTTTGACTCGTACTAAATGTCTGGCTAGGCATCATGTGCACTATAAAGCCAAAAAAGATAGATATGTAGTGTTAGTTTTTGAAGAGACTCATAACTATGAATTAACCCCATCTAGATTTGTGCACTTACATCCCATTTATCGTGAAATTTATGAAGCAGATATAGCTCAAATTGGTGGTCTTCAGTCACATGAAATTAGAAATTGTCATATAATAGAGTACACACTACAATGA 675 0.3274 MKNYDNFDSNDVRCCDSDTSDVELNDVKDDSYSVSSGYQSSNDGDSADNTYNDDLVKVDVVVGDRLVNINSINADEIRAIEFGIVDEAYEFYYRYDKCKGFSIRKSDVRTIRPEGSKITVMRLFLCNKQGLRENKYLYRIDREIDHRRLTRTKCLARHHVHYKAKKDRYVVLVFEETHNYELTPSRFVHLHPIYREIYEADIAQIGGLQSHEIRNCHIIEYTLQ 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02378 224 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 19 187 - -
Vifa2g02378 224 MobiDBLite consensus disorder prediction 30 49 - -
Vifa2g02378 224 Pfam FAR1 DNA-binding domain 90 183 IPR004330 -
Vifa2g02378 224 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02378 Vifa-Chr2 614220801 614221475 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifa2g02378 FAR1 1.8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02378 - - tpra:123905370 233.032