Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g02366 | ATGAATTACTGTAATAGAATAACGATCCAACCAACTGTAGCACCAAATTCCCTTACATATCCCAGAATTAGACCCAACTTTGTAAAACTACAGATTCAAAACTATGGTTCTAGTTCTTTGCTCAAAATAAAAGCTTCAATCAACAACGACAACAATAACTTTGTTTCATCCAAATCAGAATTAACCTTGTATGAAGTTTTGGGTATATCTGAATCTGTATCCACAGTGGAATTGAAGCGCGCTTATAAGCAGAAGGCCCGAAAGTGTCACCCAGATTTGTCTCCACCGGATCAGGTCAAAGAGTACACAAAGAGGTTCATTATGGTGCGAGAGGCTTATGAGATGTTGTCTGATCCAGTAACGAGAGCTATTTATGATAGAGATTTGGCTAAAGGGATTTCATTTGCATTTTCTACTAGCAGACGCTACTGTCATCGCTCTCATTATGACCAGGTGAGTGAAGAAAAGAAAAAATGGAAACGTCAGTGGGAATCTCAACTGGCGGAGCTGGAAAAAAAGAGTGATGGCAAGAAGGATAAAGGAAATATGGCTTGGGCTGCTCGAGTGCGTCAACGTAGTAATCATTAG | 588 | 0.398 | MNYCNRITIQPTVAPNSLTYPRIRPNFVKLQIQNYGSSSLLKIKASINNDNNNFVSSKSELTLYEVLGISESVSTVELKRAYKQKARKCHPDLSPPDQVKEYTKRFIMVREAYEMLSDPVTRAIYDRDLAKGISFAFSTSRRYCHRSHYDQVSEEKKKWKRQWESQLAELEKKSDGKKDKGNMAWAARVRQRSNH | 195 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g02366 | 195 | MobiDBLite | consensus disorder prediction | 170 | 195 | - | - | |
Vifa2g02366 | 195 | CDD | DnaJ | 62 | 118 | IPR001623 | - | |
Vifa2g02366 | 195 | Coils | Coil | 160 | 180 | - | - | |
Vifa2g02366 | 195 | MobiDBLite | consensus disorder prediction | 170 | 185 | - | - | |
Vifa2g02366 | 195 | PRINTS | DnaJ domain signature | 64 | 82 | IPR001623 | - | |
Vifa2g02366 | 195 | PRINTS | DnaJ domain signature | 101 | 121 | IPR001623 | - | |
Vifa2g02366 | 195 | PRINTS | DnaJ domain signature | 82 | 97 | IPR001623 | - | |
Vifa2g02366 | 195 | Gene3D | DnaJ domain | 46 | 142 | IPR036869 | - | |
Vifa2g02366 | 195 | SUPERFAMILY | Chaperone J-domain | 59 | 140 | IPR036869 | - | |
Vifa2g02366 | 195 | ProSitePatterns | Nt-dnaJ domain signature. | 106 | 125 | IPR018253 | - | |
Vifa2g02366 | 195 | PANTHER | CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC | 39 | 194 | - | - | |
Vifa2g02366 | 195 | Pfam | DnaJ domain | 63 | 126 | IPR001623 | - | |
Vifa2g02366 | 195 | SMART | dnaj_3 | 61 | 121 | IPR001623 | - | |
Vifa2g02366 | 195 | ProSiteProfiles | dnaJ domain profile. | 62 | 129 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g02366 | Vifa-Chr2 | 610447478 | 610448150 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g02366 | 56 | 126 | C2H2 Transcription Factor Family | AT1G74250 | 43.038 | 1.20e-06 | 46.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g02366 | - | - | psat:127083191 | 284.263 |