Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02354 ATGAGCATAAATTCAAATTATACCGTGTTCAATAGAATCACAAGATTGAATGAAACAGGTTATTTGGTTTGTTTTGATGCTCCACCTCATACTGTTTCAGATGGTTTGTGGAGTGAAAAAGAAAATGGAAGAACTCCAATGAAATCTTTTCTACCTTTGTTTGAGTTACAAGTGCTTATCATTTTCGCCCTGACGAAAAGCACCACTTTCGTCCTCAAACCGTTGAAACTTCCTGAATTCATCTTACAAATGATTGCTGGTTTGATTATAGGCATTTTGTTTGAGCTAAAGGGAATGGAGAAATACATGACAGTGGTGTTTCCTTATGGAACACATGACATAATTTCGGCGATTTCTTCAATTGGTTTTGTGTTATTCATTTTCATAAACGGTGTACAAATGGATTTCAGCATGATAACGAGGACGGGAAACAAGGCATGGGCAGTTTCGATTGTTGGTTTGGCGATACCATTGATGGCTGGTATTACACCATTGCTGATGTTCCCTGAAAAAATAATAGCCATTGAGACGAATAACGGAAATGGACTTTATGTTGCATTGGTATCTCATGCTATAAGTTCATTTGCTGTGATTGCTTCGCTTTTGAGTGAACTTCAAATCCAAAACTCCGAGCTTGGTAGATTGTCTTTGTCCTCGGCTTTAGTTAGTGACTTGTTGAGCACGATCATTACAACCAATATTATTGCGGTTAGGACTGGTTCTAGCTTCAATGTGATTTCCACCAACTTGATCTCGCTCTTTATACTTGCTGTATTCGTTCCATTAATATGCAGACCGATTCTGTTGTTGATCATTAAACGTACACCAGAAGGAACAAATGTCAAAGACAGTTACATTTATCTCATTATTTCAATGGTTTTTGCTTTGGGTGTTATATCTGTTAAAATAGGTCAAGACTTTGTCTTAGGAGCTTTCATTTTTGGACTTTCCGTTCCCGAAGGACCTCCTTTAGGATCTGCCTTGGTTAAGAAGCTTCAGTTCTTTGGACCCACATTTCTTTTGCCTATCTTTGTCACTACTTCTGTGTTGAAAGCAGATTTTTCCGTAGATTTTTCATCCTTTGTTATGGTTTCTACTGGTATGGTCATTCTCTTGACTCACGTCGTTAAAATAGCAGCATGCTTTATAACTGCCCTATGTTGCAAGATGCCTGTCAATGATGCTTTGTGTCTTTCCCTCATTTTGAACACCAAAGGTGTAGTTGAAATCGGCGCCTACCATACATTATTCGACAGTAATGTTATTGATGGGAAAACATATGGAGTTATGATGTTAAGTACAATGATCATAGGAACCATTGTGCATTGGTCAGTCAAGTTATTATACGATCCATCCAGAAAATACGCCGGATACCAAAAGCGGAACATCATGGGCTTAAAACGAAACTCGGAGCCGAGAATACTACTAACAGTTCAAAAACAGAATCATATTTCAGCAGCAACAGATTTCTTAGACATATGTTGTCCAACACCTGAGAATCCAATCGCAGTGGATGTTATTCATGTGATTGAGCTAGTTGGAAGAGCCTTACCTATTTTCATTCCTCATTGCCTTCAAAGGCAAGCATCAAATTCCGCTTCGCACAAATCATATTCGGACGATATCATCCTTGCTTTCGACATCTACGAGCACGAAAATGAAAATGCAGTATCAATAAACACTTACACAGCAATATCTCCTGCAAATCTCATGTTTGAAGACGTTTGTAACCTGGCATTGGACAAAGTTGCATCCATCATCATTCTTCCATTTCATATAAGATGGTCTAGTGATGGCACTGTTGAATCCGACGACAAGAAAGTACTAAGAGCATTGAATAAAAAAGTCCTCGAAATAGCTCCATGCTCCGTCGGAATCCTTGTAACTCGCGCTAATTCAATAGCGAAAGCAACACCAATAAACTCAATCACATCAGAATATTCCATTACTCGATTAGCCATCATTTATATAGGTGGAACCGACGATGATGAAGAAATTCTATGCTTAGCAAGACGAGCGATGAATAGTCCGAGGATCAAACTAGTTGTTTACCATCTTGTTTCTAAAGATTGCATAGCAGAATTGGAGGACTTGATGATAATTGGTGATGAAATATTGGAAGAACTGAAACATTCGGAAAATGTCCAGTATCAAGAGATTTTCACAAAGGATGGATCACAAACAGCTGGTTTTCTACGCGAGATAGTGACCGAACATGATTTTTTTATAGTCGGGAGAAGACATGGAAGTATGTCTCCTCAAACAGATGGGTTATCAGAATGGAGTGAGTTTCCAGAACTTGGTGCTGTTGGTGATTTTCTAGCATCACCTGATCTTAATAGTTGGGCATCTGTTTTGGTTGTGCAGCAACAACTTTCTCTCAGGAATGAACTCAATGGGTGGGTTTTGTAG 2412 0.3872 MSINSNYTVFNRITRLNETGYLVCFDAPPHTVSDGLWSEKENGRTPMKSFLPLFELQVLIIFALTKSTTFVLKPLKLPEFILQMIAGLIIGILFELKGMEKYMTVVFPYGTHDIISAISSIGFVLFIFINGVQMDFSMITRTGNKAWAVSIVGLAIPLMAGITPLLMFPEKIIAIETNNGNGLYVALVSHAISSFAVIASLLSELQIQNSELGRLSLSSALVSDLLSTIITTNIIAVRTGSSFNVISTNLISLFILAVFVPLICRPILLLIIKRTPEGTNVKDSYIYLIISMVFALGVISVKIGQDFVLGAFIFGLSVPEGPPLGSALVKKLQFFGPTFLLPIFVTTSVLKADFSVDFSSFVMVSTGMVILLTHVVKIAACFITALCCKMPVNDALCLSLILNTKGVVEIGAYHTLFDSNVIDGKTYGVMMLSTMIIGTIVHWSVKLLYDPSRKYAGYQKRNIMGLKRNSEPRILLTVQKQNHISAATDFLDICCPTPENPIAVDVIHVIELVGRALPIFIPHCLQRQASNSASHKSYSDDIILAFDIYEHENENAVSINTYTAISPANLMFEDVCNLALDKVASIIILPFHIRWSSDGTVESDDKKVLRALNKKVLEIAPCSVGILVTRANSIAKATPINSITSEYSITRLAIIYIGGTDDDEEILCLARRAMNSPRIKLVVYHLVSKDCIAELEDLMIIGDEILEELKHSENVQYQEIFTKDGSQTAGFLREIVTEHDFFIVGRRHGSMSPQTDGLSEWSEFPELGAVGDFLASPDLNSWASVLVVQQQLSLRNELNGWVL 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02354 803 PANTHER CATION/H + ANTIPORTER 33 791 - -
Vifa2g02354 803 Pfam Sodium/hydrogen exchanger family 59 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa2g02354 803 Gene3D - 54 455 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02354 Vifa-Chr2 606913423 606916011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02354 11 791 Antiporter Super Family AT5G22900 35.344 1.93e-146 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02354 K26731 - mtr:11420455 1021.15