Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa2g02336 | ATGGAGTTTTGGGGTGCCGAGGTTAAGGTTGGCAAATCTCTCAAGGTTGACCCACAACAATCTGAAGCTTGCATTCACCTTTCTCAGGCTGCACTTGGTGAAACTAAGAAAGACAAAGCTAATGAGCCTATTTCTCTTTACTTGAAAGTTGGTGACCAGAAGTTTGTTTTCGGAACCCTTAACAGAGAGAAAATTCCTCAGACAACTCTTGATTTGGTTCTGGACAAGGAATTTGAGCTTTCTCACAGTTCCAAAACGTCTAGTGTCCATTTCCGTGGATACAAATCTTACTACCCTTATGATGATGTTGAGGGAGATGATTATTCTGATAGTGATGAGGAGGAAATTCCTTTGGCTCAACCCATAGAAAATGGGAAAACAGAAACAAAGGCTGAGGACCAGAAAGTTTCTGAAGCTAAGAAAGCTACTGCCAAGAGTGGTACACCTGCCAAGGCTGATCCACCTGCTAAGAGTGGTCCATCCGGAAAACAAGTGAAAGTTGTTGATCCAAAGGAGGAAAATGATGATGATTCTGATGATGAGTCTGATGATGATCTTGATAGCTCTGATGAAGAGATGGACGATGTTGATAGTGAAGATGAGGATGAGAGTGATGAAGAAGATGAAGAGACTCCTGTGAAGAAGGTGGACCAGGGGAAGAAGAGGGCTAATGAATCTGCATTTAAAACCCCTGTTCCTTCCAAGAAGTCAAAAAATGCCACTCCTGAGAAAACTGATGGACATCTCTCTTGCGGTAACTGCAGCAAGACATTCACCTCTGACAGTGCACTTAGTCAGCATAGAGGCCAAAACCTCAATGGGGCGCCGCTGCTGATTTAA | 840 | 0.4345 | MEFWGAEVKVGKSLKVDPQQSEACIHLSQAALGETKKDKANEPISLYLKVGDQKFVFGTLNREKIPQTTLDLVLDKEFELSHSSKTSSVHFRGYKSYYPYDDVEGDDYSDSDEEEIPLAQPIENGKTETKAEDQKVSEAKKATAKSGTPAKADPPAKSGPSGKQVKVVDPKEENDDDSDDESDDDLDSSDEEMDDVDSEDEDESDEEDEETPVKKVDQGKKRANESAFKTPVPSKKSKNATPEKTDGHLSCGNCSKTFTSDSALSQHRGQNLNGAPLLI | 279 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa2g02336 | 279 | MobiDBLite | consensus disorder prediction | 230 | 272 | - | - | |
Vifa2g02336 | 279 | MobiDBLite | consensus disorder prediction | 103 | 279 | - | - | |
Vifa2g02336 | 279 | MobiDBLite | consensus disorder prediction | 126 | 140 | - | - | |
Vifa2g02336 | 279 | Gene3D | Nucleoplasmin core domain | 1 | 99 | - | - | |
Vifa2g02336 | 279 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 249 | 276 | IPR013087 | - | |
Vifa2g02336 | 279 | MobiDBLite | consensus disorder prediction | 103 | 117 | - | - | |
Vifa2g02336 | 279 | MobiDBLite | consensus disorder prediction | 173 | 210 | - | - | |
Vifa2g02336 | 279 | Pfam | Nucleoplasmin-like domain | 3 | 94 | IPR041232 | - | |
Vifa2g02336 | 279 | FunFam | Histone deacetylase HDT1 | 1 | 100 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa2g02336 | Vifa-Chr2 | 603745231 | 603746512 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa2g02336 | 1 | 117 | C2H2 Transcription Factor Family | AT3G44750 | 51.282 | 8.02e-30 | 111 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Vifa2g02336 | NPL | 5.6e-14 | CL0055 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa2g02336 | - | - | gmx:100792094 | 263.462 |