Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02335 ATGGGAGAAATACAGAGTGAGTTAACATGGGAGAAGATGAAAGAGGAGGAAGAAAAAGAAGAAATAGAAGCTCAAGTTGAAATTTGGAAATACATATTTGGTTTTGTTGAACTATCTGTGATCAAATGTGCAATTCAACTTGGCATAGCTGATGCAATTGAAAATCACAAAAAACCCATATCACTATTAGAGTTATCTTCAACTCTAAAATGTGACTCTTCATATCTTAACCGCATCATGAGATTCCTAGTACATAGGAAAATATTCAAAACCATTTCTACCAACTATGACAACTATCCTAGTTATGTTCAAACCCCACTTTCTCGTCGTTTGATTCGAAACGGCGAGCAGAGCATGACTGCTTTTCTTTTATTAGAGAGCAGTCATGTTATGGTAGCTCCTTGGCTTAGTCTAAGTGATCGTATTTTGGTAAATGGAAACCCTTCTTTTAAGAAGGTTCATGGTGAAGATATTTGGCGCTATGCTGCTTCAAATCTTGATCACAGTAATCTTATCAACGATGCTATGGCTTGTGATGCTAAAGTTGTTGTGCCTGCTATTGTTGAAGGTTGTAGTGAGTTGTTTGATGGTGTTGGATCATTGGTGGATGTTGGTGGTGGGAATGGTACCACCTTGAGCATCCTTGTTAAGGCTTTTCCTTGGATTCAAGGAACCAACTTTGATCTTCCACATGTCATTGATGTGGCTCTAAAGTATGATGGGATACAACACGTGGTAGGTGACATGTTTACAAGTATTTCCAAAGCTGATGCTATATTTTTTAAGTGGGTTTTGCATGATTGGGGGGATGAAGAGTGCATCAAAATTTTAAAGAATTGTAAGGAAGCTATACCAAAAGAAAATGGAAAAGTGATTATTGTTGACGTAGTTATTGAAGAAGAAAGAGAAAAACACAACAAATATGAAGACGTAAGGTTAATGTTAGACATGGTGATGATGGCACATACTAACATTGGTAAAGAAAGAACACTAAAAGAGTGGGAGCATGTCATCAAAATGGCTGGATTCAATACAATCACTGTGAAATCTATCAATGCCGTACAATCTGTAATTGTCGCCTCATGCTGA 1089 0.3719 MGEIQSELTWEKMKEEEEKEEIEAQVEIWKYIFGFVELSVIKCAIQLGIADAIENHKKPISLLELSSTLKCDSSYLNRIMRFLVHRKIFKTISTNYDNYPSYVQTPLSRRLIRNGEQSMTAFLLLESSHVMVAPWLSLSDRILVNGNPSFKKVHGEDIWRYAASNLDHSNLINDAMACDAKVVVPAIVEGCSELFDGVGSLVDVGGGNGTTLSILVKAFPWIQGTNFDLPHVIDVALKYDGIQHVVGDMFTSISKADAIFFKWVLHDWGDEECIKILKNCKEAIPKENGKVIIVDVVIEEEREKHNKYEDVRLMLDMVMMAHTNIGKERTLKEWEHVIKMAGFNTITVKSINAVQSVIVASC 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02335 362 FunFam O-methyltransferase family protein 12 111 - -
Vifa2g02335 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 362 IPR016461 GO:0008168
Vifa2g02335 362 Gene3D - 10 111 IPR036388 -
Vifa2g02335 362 Coils Coil 5 25 - -
Vifa2g02335 362 PANTHER O-METHYLTRANSFERASE 24 343 IPR016461 GO:0008168
Vifa2g02335 362 PIRSF O-mtase 6 362 IPR016461 GO:0008168
Vifa2g02335 362 Gene3D Vaccinia Virus protein VP39 112 360 IPR029063 -
Vifa2g02335 362 FunFam O-methyltransferase family protein 113 361 - -
Vifa2g02335 362 Pfam Dimerisation domain 40 84 IPR012967 GO:0046983
Vifa2g02335 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 359 IPR029063 -
Vifa2g02335 362 Pfam O-methyltransferase domain 135 344 IPR001077 GO:0008171
Vifa2g02335 362 CDD AdoMet_MTases 201 298 - -
Vifa2g02335 362 SUPERFAMILY "Winged helix" DNA-binding domain 18 115 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02335 Vifa-Chr2 603117161 603118394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02335 40 348 Monolignol Biosynthesis Gene Families AT5G54160 35.962 7.18e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02335 K22588 - gmx:100782951 453.366