Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02329 ATGGGAGAAAATCAGAGTGAGATAACATGGAGGGAAGAAAAGGAAGAAGCAGAAGCTCAAGTTGAAATTTGGAAATACATATTTGGTTTTGTAGAACTATCTGTGGTGAAATGTGCAATCCAACTTGGCATAGCTGATGCAATTGAAAAGCACAAAAAACCCATATCACTATTAGAGTTATCATCAACTCTAAAATGTGACCCTTCATATCTTAACCGCATCATGAGATTCCTAGTACATAGGAAAATATTCAAAACCATTTCTACCAACCATGACAACTATCCTAGTTATGTTCAAACCCCACTTTCTCGCCGTTTGATTCGAAACGGCGAACATAGCATGACTGCTCTTCTTTTATTAGAAAGCAGTCATGTTATGGTAGTTCCTTTGCTCAGTATAAGTGATCGTGTTCTGGTAAATGGAAATCCATCTTTTCAAAAGGTTCATGGAGAAGATCTATGGGGCTATACAGCTAAGAATCTTGATCATAGTAATCTTTTTAATGATGCTATGGCTTGTGATGCTAAAGTTATTGTGCCTGCTATTATTGAAGGTTGTAGTGAATTGTTTGATGGTGTTAAATCCATGGTGGATGTTGGTGGTGGGAATGGTACCGCTTTGAACATCCTTGTTAAGGCTTTTCCTTGGATTCAAGGAATCAACTTTGATCTTGCACATGTCATTGATGTGGCTCCAAAATATGATGGGATACAACATGTGGCAGGTGACATGTTTACAAGTGTTCCCAAAGTTGATGTTGTATTTCTTAAGTGGGTTTTGCATGATTGGGGAGATGAAGAGTGCATCAAAATCTTAAAGAATTGTAAGGAAGCTATACCAAAAGAAAATGGAAAAGTGATTATTGTTGACGTAGTTATCGAAGAAGGAGGAGGAAAACACAACAAGTATGAAGACGTAGGGTTAATGTTAGACATGGTGATGATGGCACATACGAACATTGGTAAAGAAAGAACACTAAAAGAGTGGGAGCATGTCATCAAAATGGCTGGATTCAATACAATCACTGTGAAATCTATCAATGCCGTACAGTCTGTAATTGTCGCCTCATGCTGA 1074 0.378 MGENQSEITWREEKEEAEAQVEIWKYIFGFVELSVVKCAIQLGIADAIEKHKKPISLLELSSTLKCDPSYLNRIMRFLVHRKIFKTISTNHDNYPSYVQTPLSRRLIRNGEHSMTALLLLESSHVMVVPLLSISDRVLVNGNPSFQKVHGEDLWGYTAKNLDHSNLFNDAMACDAKVIVPAIIEGCSELFDGVKSMVDVGGGNGTALNILVKAFPWIQGINFDLAHVIDVAPKYDGIQHVAGDMFTSVPKVDVVFLKWVLHDWGDEECIKILKNCKEAIPKENGKVIIVDVVIEEGGGKHNKYEDVGLMLDMVMMAHTNIGKERTLKEWEHVIKMAGFNTITVKSINAVQSVIVASC 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02329 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 354 IPR029063 -
Vifa2g02329 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 357 IPR016461 GO:0008168
Vifa2g02329 357 PANTHER O-METHYLTRANSFERASE 33 338 IPR016461 GO:0008168
Vifa2g02329 357 SUPERFAMILY "Winged helix" DNA-binding domain 13 110 IPR036390 -
Vifa2g02329 357 FunFam O-methyltransferase family protein 108 356 - -
Vifa2g02329 357 Pfam Dimerisation domain 35 79 IPR012967 GO:0046983
Vifa2g02329 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Vifa2g02329 357 Gene3D Vaccinia Virus protein VP39 108 355 IPR029063 -
Vifa2g02329 357 Gene3D - 5 106 IPR036388 -
Vifa2g02329 357 FunFam O-methyltransferase family protein 7 106 - -
Vifa2g02329 357 Pfam O-methyltransferase domain 135 339 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02329 Vifa-Chr2 601977664 601978882 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02329 35 343 Monolignol Biosynthesis Gene Families AT5G54160 36.478 4.06e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02329 K22588 - gmx:100782951 456.447