LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa2g02328	ATGGATCCTAATAAATTTAATTATCAACAATCTATGTTCAATTTCATGCAAAATTTTCAAAATCCAAAATTCTCAATTTCCATCGATGCCAACAAACTCCGCCGCTTTTTTTCCCGTCATCAACCGGAAACACTCCGCCGCATTTTTTCCGATTCAATTGTAGGAGTTGATCAAAAAGCTGAGAGTTTTTGGTTAAGAATCACTACCAATTATAACGAGTATCGTGAACAATCGCGGGAAAAGCTACGTGGGCAATTAAAATCTCGATGGCATCAAATAAATGGCTTGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACTTCGGAGAAAGATATCTTGGCTGATGCATATGCATTTTTTGCTCAAGATGAAGGTACACCATTCAATCTTGAGTACACATGGCAATTGTTAAAGGATGAACCTAAATGGATGGGAGCATCGACCGAAAATTCTTCAAAAAGAACAAAGAATTCTGCTAGTGGGGCACACTCATCATCGTCTAACCTCGCGACACCTTCAAGTTATGAGTTCAACTCATCATCACCAATGGAGCGTCCAATGGGACAACAAGCAGCAAAAAGAAAGAGTAAGGCAAAGGAAAATGCATCTGAATCACCTTCTAATATTGTGCAAGAAACATGGAATAAAAGAGTAGCGGCAATGGAAAGACTAACTCAATGTAAGGAGGACGAGATGGAGTATAAGGAAATGCAATTACTCTCGAAAGACACTTCTATGATGAATGATAGTCAACGAGATATTCAGGAAAAATATTGTAATAAGTTGAAAAAAAAATATGGATTTTAG	831	0.373	MDPNKFNYQQSMFNFMQNFQNPKFSISIDANKLRRFFSRHQPETLRRIFSDSIVGVDQKAESFWLRITTNYNEYREQSREKLRGQLKSRWHQINGLVQKFVGCYKQAVNGKKSGTSEKDILADAYAFFAQDEGTPFNLEYTWQLLKDEPKWMGASTENSSKRTKNSASGAHSSSSNLATPSSYEFNSSSPMERPMGQQAAKRKSKAKENASESPSNIVQETWNKRVAAMERLTQCKEDEMEYKEMQLLSKDTSMMNDSQRDIQEKYCNKLKKKYGF	276

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa2g02328	276	Pfam	No apical meristem-associated C-terminal domain	135	261	IPR029466	-
	Vifa2g02328	276	PANTHER	-	24	273	-	-
	Vifa2g02328	276	MobiDBLite	consensus disorder prediction	153	194	-	-
	Vifa2g02328	276	MobiDBLite	consensus disorder prediction	153	222	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa2g02328	Vifa-Chr2	601596880	601597927	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa2g02328	53	205	Glutathione S-transferase Gene Family	AT5G41240	35.404	9.78e-21	89.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa2g02328	-		-	cam:101493921	311.612