Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02324 ATGACTGCGTTTCTTTTACTAGAAAGCAGTCTTGTTATGGTAGTTCCTTGGCTCAGTCTAAGTGATCGTGTTGTGGTAAATAGAAACTCTTCTTTTAAGAAGGTTTATGGTGAAGATGTTTGGCGCTATAATGCTTCAAATCTTGATCATAGTAATTTTATCAATGATGCTATGTCTTGTGATGCTAGAGTTGTTGTGCCTGCTATTATTGAAGGTTGTAGTGAGTTGTTTGATGGTGTTAAATCCATGGTGGATGTTGATGGTGGGAATGGTACCACCTTGAACATCCTTGTTAAGGTTTTTTCTGAGATTCAAGGTATCAATTTTGATCTTGCTCATGTTATTGATGTGGCTCCTAAGTGTGATGGGGTGGAACATGTGGCTCGCAATATTTTTACAAGTGTTTTTAAAGTTGCGATTGTATTTCTTAAGATATATTATTATGTTTAA 450 0.3578 MTAFLLLESSLVMVVPWLSLSDRVVVNRNSSFKKVYGEDVWRYNASNLDHSNFINDAMSCDARVVVPAIIEGCSELFDGVKSMVDVDGGNGTTLNILVKVFSEIQGINFDLAHVIDVAPKCDGVEHVARNIFTSVFKVAIVFLKIYYYV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02324 149 PANTHER O-METHYLTRANSFERASE 14 142 IPR016461 GO:0008168
Vifa2g02324 149 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 135 IPR029063 -
Vifa2g02324 149 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 149 IPR016461 GO:0008168
Vifa2g02324 149 Pfam O-methyltransferase domain 17 142 IPR001077 GO:0008171
Vifa2g02324 149 Gene3D Vaccinia Virus protein VP39 1 146 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02324 Vifa-Chr2 600505941 600506390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02324 1 144 Monolignol Biosynthesis Gene Families AT5G54160 34.028 1.74e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02324 K22588 - qsu:112000801 174.096