Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02322 ATGACTGCGTTTCTTTTACTAGAAAGCAGTCTTGTTATGGTAATTCCTTGGCTCAGTCTAAGTGATCGTGTTCTGGTAAATAGAAACTCTTCTTTTAAGAAGGCTTATGGTGAAGATGTTGGGCGCTATGATGCTTCAAATCTTGATCATAGTAATCTTATCAATGATGCTATGTCTTGTGATGCTAGAGTTGTTGTGCCTGCTATTATTGAAGGTTGTAGTGAGTTGTTTGATGGTGTTAAATCCATGGTGGATGTTGATGGTGGGAATGGTACCACCTTGAACATCCTTGTTAAGGTTTTTTCTGAGATTCAAGGTATCAATTTTGATCTTGCTCATGTTATTGATGTGGCTCCTAAGTGTGATGGGGTGGAACATGTGGCTGGCAATATGTTTACAAGTGTTTTTAAAGTTGCGGTTCTATTTCTTAAGGTATATTGTTATGTTTAA 450 0.3733 MTAFLLLESSLVMVIPWLSLSDRVLVNRNSSFKKAYGEDVGRYDASNLDHSNLINDAMSCDARVVVPAIIEGCSELFDGVKSMVDVDGGNGTTLNILVKVFSEIQGINFDLAHVIDVAPKCDGVEHVAGNMFTSVFKVAVLFLKVYCYV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02322 149 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 149 IPR016461 GO:0008168
Vifa2g02322 149 Pfam O-methyltransferase domain 17 144 IPR001077 GO:0008171
Vifa2g02322 149 Gene3D Vaccinia Virus protein VP39 1 148 IPR029063 -
Vifa2g02322 149 PANTHER O-METHYLTRANSFERASE 15 144 IPR016461 GO:0008168
Vifa2g02322 149 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 136 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02322 Vifa-Chr2 600472157 600472606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02322 1 148 Monolignol Biosynthesis Gene Families AT5G54160 36.486 2.69e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02322 K22588 - qsu:112000801 177.178