Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02275 ATGGCTCGTGAACAACTAGGAGTTCTAAGTGCTCTTGATTCAGCCAAGACACAATGGTACCATTTCACTGCCATCATAATTGCTGGTATGGGATTTTTCACTGATGCATACGACCTTTTCTGCATACCAAATGTCACCAAGTTACTCGGAAGAATATACTACACACACCCGAATTCACTAAAACCAGGTACTTTGCCTCCAAATGTCTCAGCAGCAGTAAACGGTGTAGCACTTTGTGGCACTTTAGCAGGCCAACTCTTCTTCGGTTGGCTTGGTGACAAAATGGGAAGGAAAAAAGTTTATGGTCTAACTCTTGCTCTTATGGTATTCTCTTCTCTTGCTTCTGGTCTTTCTTTTGGTCATTCAGCTAAGGGTACGATTGCGACTCTTTGTTTCTTTAGATTCTGGCTTGGTTTTGGTATTGGTGGTGATTACCCTCTTTCTGCTACCATCATGTCTGAATATGCTAATAAAAAGACTCGAGGCGCGTTTATTGCTTCGGTTTTTGCTATGCAAGGGTTCGGAATTTTGGCGGGTGGAATCGTTTCTCTTGTGGTTTCCACTGCTTTTGATCATGCTTATAAGGCTCCGGCTTATAAGGTGGATGCTGCAGCATCACTTGTACCTGAAGCTGATTATGTTTGGAGAATTATTCTCATGTTTGGTGCTGTTCCTGCTGGTTTAACTTATTATTGGCGTATGAAAATGCCCGAGACAGCAAGGTACACTGCACTTGTTGCTAAGAATGCAAAACAAGCGGCGCAAGACATGTCAATGGTGTTACAAGTTGAAATTGAAGCCGAGCAAGAGAAAGTAGAGAAGATAGGTGTGAGAGAACAAAACAGTTTTGGTTTGTTTAGTAAAGAATTTCTTAGACGACACGGTCTTCATCTACTTGGAACGACTTCGACCTGGTTTCTTCTTGACATTGCTTATTACAGTTCAAATCTTTTTCAAAAAGATATTTATAGTAGTATTGGTTGGCTTCCACCGGCCGAAGATATGAACGCGATTCACGAAGTTTTCAAGGTTGCTAGAGCGACGACGCTTATAGCACTTTGCGGAACGGTTCCGGGATACTGGTTTACAGTGGCTTTTATTGACATAGTAGGCCGTTTCGCAATTCAAATAATGGGATTCTTCTTCATGACTGTGTTCATGTTTGCGCTCGCGCTTCCGTATCATCATTGGACTAAGAAAGAAAACCGAGTTGGGTTTCTTGTTATGTACGCAATGACTTTTTTCTTTGCGAATTTTGGCCCAAACTCAACAACTTTTGTTGTGCCGGCCGAGATTTTTCCAGCTAGGTTGAGATCTACATGTCATGGAATTTCTTCTGCAGCAGGGAAAGCTGGAGCAATTATAGGTGCATTTGGATTTTTGTATGCTTCTCAAAGTAAGGATCCGAAAAAGAGAGATGCAGGGTACCCTGCTGGGATTGGAATGAAGAACACTCTTATTTTGCTTGCTGTGATTAACTGTCTTGGCATATTTTTCACATTTCTTGTGCCGGAAGCTAATGGAAAATCTTTGGAAGAGATGAGCGGGGAGAATGAAGAAGAAGGTGATGATGCTGTTAGTGTTGATCCACAAGCATCTTCTACTAGGACTGTTCCTGTGTGA 1623 0.4202 MAREQLGVLSALDSAKTQWYHFTAIIIAGMGFFTDAYDLFCIPNVTKLLGRIYYTHPNSLKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLALMVFSSLASGLSFGHSAKGTIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIASVFAMQGFGILAGGIVSLVVSTAFDHAYKAPAYKVDAAASLVPEADYVWRIILMFGAVPAGLTYYWRMKMPETARYTALVAKNAKQAAQDMSMVLQVEIEAEQEKVEKIGVREQNSFGLFSKEFLRRHGLHLLGTTSTWFLLDIAYYSSNLFQKDIYSSIGWLPPAEDMNAIHEVFKVARATTLIALCGTVPGYWFTVAFIDIVGRFAIQIMGFFFMTVFMFALALPYHHWTKKENRVGFLVMYAMTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISSAAGKAGAIIGAFGFLYASQSKDPKKRDAGYPAGIGMKNTLILLAVINCLGIFFTFLVPEANGKSLEEMSGENEEEGDDAVSVDPQASSTRTVPV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02275 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 506 - -
Vifa2g02275 540 CDD MFS_PhT 25 505 - -
Vifa2g02275 540 NCBIfam phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vifa2g02275 540 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Vifa2g02275 540 Gene3D MFS general substrate transporter like domains 272 530 IPR036259 -
Vifa2g02275 540 Pfam Sugar (and other) transporter 26 515 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vifa2g02275 540 MobiDBLite consensus disorder prediction 512 540 - -
Vifa2g02275 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
Vifa2g02275 540 FunFam Inorganic phosphate transporter 1-6 20 528 - -
Vifa2g02275 540 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02275 Vifa-Chr2 591363946 591365649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02275 1 540 Inorganic Solute Cotransporters AT2G32830 76.199 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02275 K08176 - tcc:18602672 865.144