Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02255 ATGGCTTCACCAACTTCTCCTACCATTTACTTTCTCCTCCTAACTCTTCTTGTCTCTCTACTTCACACGCCCACTTTTGCACTGAAAAAAAAGTCATATGTGGTTTACTTAGGAAGCCATTCACATGATTCAGAATTGTCTTCAGTTGAGTTCAACCGTGTAACAGATTCTCACAATGAGTTTCTAGGATCTTTCTTGAAAAGTTCTGATACAGCGAAAGAGTCCATTTTTTACTCATACACAAGACATATCAATGGTTTTGCTGCAACTTTGGAAGAAGAAGTAGCAGCTGAGATAGCAAAACATCCAAATGTGTTGTCAGTGTTTGAGAACAATGGAAGGAAACTACACACAACTCGTTCATGGGGATTCATGGGATTAGAAGATGATTACGGAGTCATAACATCCAACTCAATATGGAACAAAGCCAGATTTGGTGAAGGTGTCATCATAGCAAACCTTGATACAGGCGTTTGGCCTGAATCAAAGAGTTTTAATGATGAAGGGTTTGGACCAATTCCATCCAAGTGGAGAGGAATCTGTGAAAAAGGGTCTGATCTTGCTTTCCACTGCAACAGGAAACTAATTGGTGCAAGGTATTTCAACAAAGGCTATGCTTCTAGGTTATCTACCCCGGTCAACTCGTCCTCTAACACGCCTCGTGACAATGAAGGCCATGGATCTCATACATTATCGACAGCCGGTGGAAACATGGTATCTGGCGTAAGTGTTTACGGTCAAGGCTATGGAACAGCAAAGGGTGGTTCACCGAAAGCAAGAGTTGCGTCATACAAAGTTTGTTGGCCTCCGATTAATGGTGACGAGTGCTTTGATGCAGACATACTTGCAGCCTTTGATATGGCTATTCATGACGGGGTTGATGTTTTGTCTTTGTCACTTGGTGGATCTGCTTCTAACTTTTTCAATGATAGTGTTGCTATTGGATCTTTCCATGCTGCTAAGAAAGGTATTGTTGTTGTTTGTTCTGCTGGCAATAGTGGACCAAATGAGGCTACCGTAGAAAATCTAGCTCCTTGGTATATTACGGTTGGTGCTAGCACAATGGATAGAGAGTTTCCTAGTTATGTTGTTCTTGGTAACAATTTAACCTTAAAGGGAGAGAGCTTATCAGCTACAAGATTAGCGCACAAATTCTACCCGATCATTAAAGCAACGGATGCTAAGTTAGCAAGTGCAACAAATGAAGACGCTGTGCTTTGCCAGAATGGAACTCTGGATCCTAACAAGGTGAAGGGAAAGATAGTATTATGCCTGAGAGGAATAAATGCAAGAGTGGATAAGGGAGAACAAGCTCTTCAAGCTGGTGCTGTGGGAATGGTCCTTGCCAATGATATAATTACTGGAAATGAAATCATAGCTGATCCTCATGTTCTTCCTGCATCTCACATCAATTTCTCCGATGGATTAAAAGTCTTTAATTACGTCAACTCATCCAAGTCTCCAGTGGCTTATATTGCATATCCAACAACAAAATTGCATACTAAGCCGGCCCCTTTCATGGCAGCATTTTCATCCAAAGGACCAAATACTATGGTACCTGAAATTCTAAAGCCTGATATCACTGCACCAGGAGTGTCAATTATAGCCGCCTACACTGAAGCAGAAGGCCTATTGAAAGCTCTGTACCCTTCTTGGAGTCCAGCAGCTATTAAATCAGCTATCATGACCACAGCTACAACATTAGACAACGAGGCAGAGCCAATTCTGAATGCATCCTTCATCCAAACAACACCATTTAGCTATGGAGCGGGACATGTTCAACCGAACAAAGCAATGGATCCTGGCCTTGTTTATGACACAACCATGAATGATTACTTCAACTTCTTATGTACTTTAGGCTATAATGAAACTGAAAGGTCACTTTTTTCAAATGCTACTTACCATCGCCATAAGAATTTTAGTCTCCTCAACCTAAACTACCCTTCAATCACTGTCCCAAATCTCTCTGGATCAGTGACGGTTCAAAGAACACTGAAAAATGTTGGTGCTCCAGCAACATACGTTGTCCATGTTCAGAATCCAAATGGTATAACTGTTTCTGTGAAACCAAGTATATTGGAGTTCAAACATGTTGGCGAAGAAAAGAGGTTTAAGGTAAAATTGAAGACAAAGAAAGGAAAAGCAACAAAGAGTTATGTGTTTGGGAAGATGACTTGGTCAGATGGGAAGCATTATGTTAAGAGTCCATTAGTTGTGAAAGCTATTTAG 2229 0.41 MASPTSPTIYFLLLTLLVSLLHTPTFALKKKSYVVYLGSHSHDSELSSVEFNRVTDSHNEFLGSFLKSSDTAKESIFYSYTRHINGFAATLEEEVAAEIAKHPNVLSVFENNGRKLHTTRSWGFMGLEDDYGVITSNSIWNKARFGEGVIIANLDTGVWPESKSFNDEGFGPIPSKWRGICEKGSDLAFHCNRKLIGARYFNKGYASRLSTPVNSSSNTPRDNEGHGSHTLSTAGGNMVSGVSVYGQGYGTAKGGSPKARVASYKVCWPPINGDECFDADILAAFDMAIHDGVDVLSLSLGGSASNFFNDSVAIGSFHAAKKGIVVVCSAGNSGPNEATVENLAPWYITVGASTMDREFPSYVVLGNNLTLKGESLSATRLAHKFYPIIKATDAKLASATNEDAVLCQNGTLDPNKVKGKIVLCLRGINARVDKGEQALQAGAVGMVLANDIITGNEIIADPHVLPASHINFSDGLKVFNYVNSSKSPVAYIAYPTTKLHTKPAPFMAAFSSKGPNTMVPEILKPDITAPGVSIIAAYTEAEGLLKALYPSWSPAAIKSAIMTTATTLDNEAEPILNASFIQTTPFSYGAGHVQPNKAMDPGLVYDTTMNDYFNFLCTLGYNETERSLFSNATYHRHKNFSLLNLNYPSITVPNLSGSVTVQRTLKNVGAPATYVVHVQNPNGITVSVKPSILEFKHVGEEKRFKVKLKTKKGKATKSYVFGKMTWSDGKHYVKSPLVVKAI 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02255 742 Pfam Fibronectin type-III domain 644 739 IPR041469 -
Vifa2g02255 742 CDD Peptidases_S8_3 115 566 IPR034197 -
Vifa2g02255 742 ProSiteProfiles Serine proteases, subtilase domain profile. 121 599 - -
Vifa2g02255 742 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 45 739 IPR045051 -
Vifa2g02255 742 FunFam Subtilisin-like protease SBT5.3 22 117 - -
Vifa2g02255 742 Pfam Peptidase inhibitor I9 32 117 IPR010259 -
Vifa2g02255 742 MobiDBLite consensus disorder prediction 209 235 - -
Vifa2g02255 742 SUPERFAMILY Subtilisin-like 116 603 IPR036852 GO:0004252|GO:0006508
Vifa2g02255 742 Pfam Subtilase family 146 537 IPR000209 GO:0006508|GO:0008236
Vifa2g02255 742 Gene3D Peptidase S8/S53 domain 148 541 IPR036852 GO:0004252|GO:0006508
Vifa2g02255 742 Gene3D - 356 500 - -
Vifa2g02255 742 SUPERFAMILY PA domain 403 481 IPR046450 -
Vifa2g02255 742 FunFam subtilisin-like protease SBT1.5 356 499 - -
Vifa2g02255 742 Pfam PA domain 407 476 IPR003137 -
Vifa2g02255 742 Gene3D - 616 742 - -
Vifa2g02255 742 Gene3D Peptidase S8/S53 domain 543 612 IPR036852 GO:0004252|GO:0006508
Vifa2g02255 742 FunFam Subtilisin-like protease SBT1.5 616 742 - -
Vifa2g02255 742 FunFam Subtilisin-like protease SBT1.5 148 377 - -
Vifa2g02255 742 CDD PA_subtilisin_like 362 492 - -
Vifa2g02255 742 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02255 Vifa-Chr2 584573414 584578172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02255 32 740 Subtilisin-like Serine Gene Family AT2G04160 60.162 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02255 - - psat:127083337 1173.3