Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02242 ATGGGAGCCAAAATAAATATCCACCAAGTGTTTGTTTTTTCTATCTTGATCTTTCTCATAATCCCAAGTCTAATAGTTGCGGAGTGCACATGCGATGAAGAAGATGAAGATAGAAACAAATCCAAAGCACTTCGTTATAAGATAGCTGCTTTAGTTTCAATAATGGTTGCAAGTGCAATTGGTGTTTGTATACCACTGCTTGGTAAAGTCATACCGGCTTTAAGTCCGGAGAAAGATATATTTTTTGTCATCAAAGCCTTTGCTGCTGGTGTGATATTATCAACCGGTTTCATTCATGTGCTTCCTGATGCTTTTGAGAATCTCACTTCACCATGTTTAAAGGAACATCCTTGGGGAGATTTTCCGTTTACTGGTTTTGTGGCTATGTGCACTGCTATGGGGACTCTTATGATTGATACATATGCCACTGCTTATTTTCAAAAGCAGTACTCGAAAAAGACACCGACACAAGTCGAGAGTCATGAGTCAACCTCAGATGTAGAGCAAAATGGACATGTGCATGTTCATACTCATGCTTCACATGGTCATGCACATGGCCATGTTTCTTCGAATCCATCATCAGAACTTCTTCGTAATAGGGTTGTATCACAGGTATTGGAGTTGGGAATTATTGTTCACTCGGTTATAATAGGAATTTCTCTGGGTGCTTCGGAGAGTCCTAAAACCATAAGACCACTAGTAGGTGCGTTGACTTTTCATCAGTTCTTTGAAGGCATGGGACTTGGAAGTTGCATAACTCAGGCAAATTTCAAGAGTCTATCTATTACAGTCATGGGATTGTTCTTTGCTTTGACAACTCCAGTAGGGATTGGAATTGGCTTAGGGATTAGTAGTGTTTATGATGAGAATAGTCCAACAGCTCTTATTGTTGAAGGAATCTTCAATGCAGCTTCTGCTGGGATCTTAATTTATATGGCACTTGTAGATCTTCTTGCTGCTGATTTTATGAATCCAAGGATGCAAAACAGTGGTAGTCTTAGGTTAGGATGTAATATATCTCTTCTATTAGGAGCTGGTTGTATGTCTCTTATAGCTAAATGGGCTTGA 1068 0.3942 MGAKINIHQVFVFSILIFLIIPSLIVAECTCDEEDEDRNKSKALRYKIAALVSIMVASAIGVCIPLLGKVIPALSPEKDIFFVIKAFAAGVILSTGFIHVLPDAFENLTSPCLKEHPWGDFPFTGFVAMCTAMGTLMIDTYATAYFQKQYSKKTPTQVESHESTSDVEQNGHVHVHTHASHGHAHGHVSSNPSSELLRNRVVSQVLELGIIVHSVIIGISLGASESPKTIRPLVGALTFHQFFEGMGLGSCITQANFKSLSITVMGLFFALTTPVGIGIGLGISSVYDENSPTALIVEGIFNAASAGILIYMALVDLLAADFMNPRMQNSGSLRLGCNISLLLGAGCMSLIAKWA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02242 355 Pfam ZIP Zinc transporter 46 352 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vifa2g02242 355 PANTHER ZINC/IRON TRANSPORTER 43 349 - -
Vifa2g02242 355 NCBIfam ZIP zinc/iron transport family 29 355 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02242 Vifa-Chr2 579537050 579538796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02242 27 355 Inorganic Solute Cotransporters AT3G12750 57.530 1.22e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02242 K14709 - gmx:547695 529.635