Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02222 ATGGTTAAATATAATGTTATTTTGTTCTTCTTTCTCTATATTGTTTTCTCATCAATGACTTTTTGGAGCTCTTGTGCCACTGAAAGTGTTGATGAAAGCAGTAAACTTCACATTGTTTACATGGGCTCACTTCCTAATAGTGTATCATACTCTCCAACATCGCATCATCTCAGTATGTTGGAACAAATTATTGGGGAAAGTGGTGTAGAAAATCTCTTGGTACAAAGTTATAAGAGAAGTTTTAATGGTTTTTCCGCCATACTTAATGATCAACAAAAGAAAAAACTTCTTAGCATGAATGATGTGGTTTCAGTTTTTCCAAGTCAAAATTTTCACATACAAACTACAAGATCGTGGGATTTTCTTGGATTTTCTCAATCAATCAAAAGAGATATAATTATTGAGAGTGAATTGATAATTGGAGTTATGGATACCGGAATATGGCCCGAGTCTGAAAGTTTCAACGATAAAGGTTTTGGTCCCATTCCAAATAAATGGATGGGAGTTTGTAAAGGCGGTTTTAACTTCACTTGTAACAAAAAAATTATTGGAGCAAGATTTTACGGTCGTGGAGTGGATAATGCAAGAGATAAGGAAGGTCATGGAACTCACACATCATCAACTGCAGGTGGAAGAGAGGTGCAAGGCGTGAGCTTTTATGATCTTGCAAAAGGTACCGCTAGAGGTGGAGTTCCATCTTCAAGGATTGCTATGTACAAAATATGTAGTCTAGATGGTTCATGCAGTAGTAGTGATATCTTAGCTGCATTTGATGATGCCATTGCTGATGGAGTGGACATCATCACAATCTCAATTGGGTTCTCATATGGCCTCGAATTTCTAAAAGATCCTATAGCCATTGGTTCTTTTCATGCCATGGAGAAAGGAATACTCACATCGCATTCTGCAGGAAACTCTGGTCCTAGCCCGAGTTCTACTGATAGTGTAGCACCTTGGTTATTTAGTGTTGCGGCAACTACCATAGATCGTCAATTCATTGATAAACTCATTCTTGGAAATGGAAATATTCTCTCTGGTAGGTCAGTTAATACTTTCACTTCAAATGGCACAAAAATTTCAATAGTTGAGGGTTCTTGCTTGGACAACTTTAATAAAACAATGGTGAAAGGTAAAATTATTTTGTGTGGATCACCTTGGCATGAAGGATCAGCTTTTGAAAGTGGCGCATTTGGTATAGTCTCAAATGTTGAGCTAAACGATGTCTCTTTTGTATCTCAAATTCCTTCAGTTAACCTAGATTCAAAAGACTATGATATTGTTCAATCTTACACAAATTTAACTAAATCCCCTATAGCTGAAATTTTGAAGAGTGAGATCTTCCATGACACAACTGCTCCTAGAATTGCATCTTTCTCTTCTTGTGGCCCGAACTCAGTGGTTCCAGACATTATGAAACCTGATATAAGTGCCCCTGGAGTGGGTATCTTGGCTGCATTTTCACCTATAGCCCCACCCTCTGGAAATGTCGGTGACAGGAGAAAGGTCAACTACAACATAGATTCTGGAACCTCTATGGCATGTCCCCACATTGCTGGAATTGCTGCATATGTGAAATCTTTTCATCCAGATTGGTCACCTGCAGCTATCAAATCTGCCATTATGACTACAGCAAAATCAATGAATGGTACTTATAATAATATGGCTGGTGAGTTTTCTTATGGATCAGGGAATGTCAATCCACGACTAGCTATTCAACCAGGACTTATTTATAACATTACAAAGGAAGATTATGTGCAAATGCTTTGTAGTTATGGTTACGATAATGGAAAAATTAAACAAATTAGTGGAGGAAAATCAAGTTGTCATGGAGCTTCTAACCCATCTTTGGTAAAAAACCTAAATTATCCTGCACTAGTGATTTCAGTGTTTCCTCATAAACCTTTCAATATCAAGTTTCCTAGAACAGTTACTAATGTTGGCTTACACAACACAACCTACAGGGCTATTATCACCCCAATTCCAAATGTCAAGATTAAGGTGGAGCCAAATCTTCTCTCGTTCAAATCTTTACAAGAGACACAATCATTTGTTGTCACCGCTATTGGGAGAGTAAGATCACGTCAAGCTGAGTTTTCTTCGTCACTTGTTTGGTCAGATGGCACCCACAATGTCAAGAGCCCAATCATCGTGCATATAAAATCCTAA 2166 0.3786 MVKYNVILFFFLYIVFSSMTFWSSCATESVDESSKLHIVYMGSLPNSVSYSPTSHHLSMLEQIIGESGVENLLVQSYKRSFNGFSAILNDQQKKKLLSMNDVVSVFPSQNFHIQTTRSWDFLGFSQSIKRDIIIESELIIGVMDTGIWPESESFNDKGFGPIPNKWMGVCKGGFNFTCNKKIIGARFYGRGVDNARDKEGHGTHTSSTAGGREVQGVSFYDLAKGTARGGVPSSRIAMYKICSLDGSCSSSDILAAFDDAIADGVDIITISIGFSYGLEFLKDPIAIGSFHAMEKGILTSHSAGNSGPSPSSTDSVAPWLFSVAATTIDRQFIDKLILGNGNILSGRSVNTFTSNGTKISIVEGSCLDNFNKTMVKGKIILCGSPWHEGSAFESGAFGIVSNVELNDVSFVSQIPSVNLDSKDYDIVQSYTNLTKSPIAEILKSEIFHDTTAPRIASFSSCGPNSVVPDIMKPDISAPGVGILAAFSPIAPPSGNVGDRRKVNYNIDSGTSMACPHIAGIAAYVKSFHPDWSPAAIKSAIMTTAKSMNGTYNNMAGEFSYGSGNVNPRLAIQPGLIYNITKEDYVQMLCSYGYDNGKIKQISGGKSSCHGASNPSLVKNLNYPALVISVFPHKPFNIKFPRTVTNVGLHNTTYRAIITPIPNVKIKVEPNLLSFKSLQETQSFVVTAIGRVRSRQAEFSSSLVWSDGTHNVKSPIIVHIKS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02222 721 CDD PA_subtilisin_like 336 441 - -
Vifa2g02222 721 Gene3D - 329 448 - -
Vifa2g02222 721 ProSitePatterns Serine proteases, subtilase family, serine active site. 509 519 IPR023828 -
Vifa2g02222 721 Pfam Fibronectin type-III domain 619 717 IPR041469 -
Vifa2g02222 721 FunFam Subtilisin-like protease SBT1.5 137 338 - -
Vifa2g02222 721 ProSiteProfiles Serine proteases, subtilase domain profile. 118 571 - -
Vifa2g02222 721 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 717 IPR045051 -
Vifa2g02222 721 Gene3D - 588 720 - -
Vifa2g02222 721 Pfam Subtilase family 136 548 IPR000209 GO:0006508|GO:0008236
Vifa2g02222 721 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Vifa2g02222 721 Gene3D Peptidase S8/S53 domain 138 584 IPR036852 GO:0004252|GO:0006508
Vifa2g02222 721 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 113 IPR037045 -
Vifa2g02222 721 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Vifa2g02222 721 CDD Peptidases_S8_3 111 544 IPR034197 -
Vifa2g02222 721 SUPERFAMILY Subtilisin-like 137 577 IPR036852 GO:0004252|GO:0006508
Vifa2g02222 721 PRINTS Subtilisin serine protease family (S8) signature 508 524 IPR015500 -
Vifa2g02222 721 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Vifa2g02222 721 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02222 Vifa-Chr2 575615108 575617730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02222 41 718 Subtilisin-like Serine Gene Family AT5G59190 52.790 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02222 - - psat:127076787 1252.27